RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	DNAJB14	Q8TBM8	379 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	TMEM171	Q8WVE6	324 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	CCT6B	Q92526	530 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	CCDC47	Q96A33	483 aa	Known RBP	4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	TMEM41A	Q96HV5	264 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	FBXL20	Q96IG2	436 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	SNX27	Q96L92	541 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	WDR12	Q9GZL7	423 aa	Known RBP	4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	IKZF4	Q9H2S9	585 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	DHX36	Q9H2U1	1008 aa	Known RBP	4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	FAM83D	Q9H4H8	585 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	CXorf56	Q9H5V9	222 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	CXorf36	Q9H7Y0	433 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	GBA2	Q9HCG7	927 aa	Predicted RBP	4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	CDY1	Q9Y6F8	540 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	KAT6B	Q8WYB5	2073 aa		4.58	□□□□□ -1.68
LRRC28-222	ENST00000561431	PXDNL	A1KZ92	1463 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	COL15A1	P39059	1388 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	USP42	Q9H9J4	1324 aa	Known RBP	4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	CENPVL1	A0A0U1RR11	272 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	FAM170A	A1A519	330 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	TMEM200C	A6NKL6	621 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	CLCA1	A8K7I4	914 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	PPM1D	O15297	605 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	HTATSF1	O43719	755 aa	Known RBP	4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	PEX1	O43933	1283 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	SKAP2	O75563	359 aa	Predicted RBP	4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	PEX11B	O96011	259 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	A1BG	P04217	495 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	PPP3CB	P16298	524 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	KCNA3	P22001	575 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	NR4A1	P22736	598 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	PDE6C	P51160	858 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	COPA	P53621	1224 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	NANOS3	P60323	173 aa	Known RBP	4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	ITIH3	Q06033	890 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	ABHD18	Q0P651	414 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	TEF	Q10587	303 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	PDE1C	Q14123	709 aa	Predicted RBP	4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	TOMM20	Q15388	145 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	SF3B3	Q15393	1217 aa	Known RBP	4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	ZIK1	Q3SY52	487 aa	Predicted RBP	4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	FAXC	Q5TGI0	409 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	ARMC3	Q5W041	872 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	MZT2B	Q6NZ67	158 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	LVRN	Q6Q4G3	990 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	CRTC1	Q6UUV9	634 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	HSCB	Q8IWL3	235 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	CLASRP	Q8N2M8	674 aa	Known RBP	4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	SSH3	Q8TE77	659 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	OSCP1	Q8WVF1	389 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	ZNF503	Q96F45	646 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	OSBPL9	Q96SU4	736 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	ADAM2	Q99965	735 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	AMBRA1	Q9C0C7	1298 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	ZCWPW1	Q9H0M4	648 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	CYP4F11	Q9HBI6	524 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	RIC8A	Q9NPQ8	531 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	TMEM74B	Q9NUR3	256 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	TMOD4	Q9NZQ9	345 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	LRFN1	Q9P244	771 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	SRP68	Q9UHB9	627 aa	Known RBP	4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	USP22	Q9UPT9	525 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	HPSE	Q9Y251	543 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	ZBTB1	Q9Y2K1	713 aa		4.57	□□□□□ -1.68
LRRC28-222	ENST00000561431	BRCA1	P38398	1863 aa	Known RBP	4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	DLEC1	Q9Y238	1755 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431		A0A087WV62	115 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	FAM234B	A2RU67	622 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	MARCH11	A6NNE9	402 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	CHL1	O00533	1208 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	YY2	O15391	372 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	PIP5K1C	O60331	668 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	CCNT2	O60583	730 aa	Known RBP	4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	BAIAP3	O94812	1187 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	PDHA1	P08559	390 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	MMP10	P09238	476 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	ADORA2A	P29274	412 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	CHKA	P35790	457 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	IL6ST	P40189	918 aa	Predicted RBP	4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	ALDH9A1	P49189	494 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	DPT	Q07507	201 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	DDR1	Q08345	913 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	CCNI	Q14094	377 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	NPY5R	Q15761	445 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	PTCHD3	Q3KNS1	767 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	CCDC38	Q502W7	563 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	HSP90AB3P	Q58FF7	597 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	CERCAM	Q5T4B2	595 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	FCRL6	Q6DN72	434 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	UBE2Q1	Q7Z7E8	422 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	GPR149	Q86SP6	731 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	TTC5	Q8N0Z6	440 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	AMER2	Q8N7J2	671 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	VGLL2	Q8N8G2	317 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	CACTIN	Q8WUQ7	758 aa	Known RBP	4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	CAVIN3	Q969G5	261 aa		4.56	□□□□□ -1.68
LRRC28-222	ENST00000561431	FKBP10	Q96AY3	582 aa		4.56	□□□□□ -1.68

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