RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TMA16Q96EY4 203 aaKnown RBP12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 IRX2Q9BZI1 471 aaPredicted RBP12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 ULBP1Q9BZM6 244 aa12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 C6orf106Q9H6K1 298 aaPredicted RBP12.35□□□□□ -0.43
CARMIL3-204ENST00000561354 PTPRBP23467 1997 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 TULP2O00295 520 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 PCDHGA12O60330 932 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 TSPAN3O60637 253 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 ATXN1LP0C7T5 689 aaKnown RBP12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 BCAT1P54687 386 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 FNDC3BQ53EP0 1204 aaKnown RBP12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 MPP7Q5T2T1 576 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 BSPRYQ5W0U4 402 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 C19orf48Q6RUI8 117 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 CHST9Q7L1S5 443 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 PDZD3Q86UT5 571 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 AHI1Q8N157 1196 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 SCML4Q8N228 414 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 GALNT15Q8N3T1 639 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 MDM1Q8TC05 714 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 RNF139Q8WU17 664 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 CYB5D2Q8WUJ1 264 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 KCTD13Q8WZ19 329 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 NDRG1Q92597 394 aaKnown RBP12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 TATDN2Q93075 761 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 BTBD1Q9H0C5 482 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 LRRC4Q9HBW1 653 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 TM9SF3Q9HD45 589 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 PRSS16Q9NQE7 514 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 ABCC13Q9NSE7 274 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 TSPAN16Q9UKR8 245 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 ANKRD6Q9Y2G4 727 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 COQ4Q9Y3A0 265 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 SNX11Q9Y5W9 270 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 SLCO1B1Q9Y6L6 691 aa12.34□□□□□ -0.43
CARMIL3-204ENST00000561354 DMXL2Q8TDJ6 3036 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 TNFSF14O43557 240 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 SEMA4FO95754 770 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 ATP5BP06576 529 aaKnown RBP12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 DLDP09622 509 aaKnown RBP12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 PABPC1P11940 636 aaKnown RBP12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 CD27P26842 260 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 NDUFA8P51970 172 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 RPS14P62263 151 aaKnown RBP12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 ADIGQ0VDE8 80 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 BST2Q10589 180 aaKnown RBP12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 GOLGA7BQ2TAP0 167 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 COL28A1Q2UY09 1125 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 SGO2Q562F6 1265 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 ZNF557Q8N988 423 aaPredicted RBP12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 SNX19Q92543 992 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 IGSF8Q969P0 613 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 BIRC7Q96CA5 298 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 SPATA32Q96LK8 384 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 SGK2Q9HBY8 427 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 CNGB3Q9NQW8 809 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 ABCB8Q9NUT2 735 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 HESX1Q9UBX0 185 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 SUN2Q9UH99 717 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 SFMBT1Q9UHJ3 866 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 GGA2Q9UJY4 613 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 BTBD3Q9Y2F9 522 aa12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 MUC22E2RYF6 1773 aaPredicted RBP12.33□□□□□ -0.44
CARMIL3-204ENST00000561354 WDFY3Q8IZQ1 3526 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 YJEFN3A6XGL0 299 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 E7ENQ6 273 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 CETN3O15182 167 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 PAPSS1O43252 624 aaPredicted RBP12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 DFNA5O60443 496 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 DNTTP04053 509 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 GRK6P43250 576 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 CCT8P50990 548 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 CUL2Q13617 745 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 NFKBIBQ15653 356 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 TTC31Q49AM3 519 aaPredicted RBP12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 SOWAHCQ53LP3 525 aaPredicted RBP12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 MBLAC2Q68D91 279 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 MSANTD2Q6P1R3 559 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 KRBA2Q6ZNG9 492 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 ZC3H3Q8IXZ2 948 aaKnown RBP12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 SIX6OS1Q8N1H7 587 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 ZNF366Q8N895 744 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 ENGASEQ8NFI3 743 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 EDEM1Q92611 657 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 AZIN2Q96A70 460 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 ORAI3Q9BRQ5 295 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 KIAA1257Q9ULG3 409 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 SCML1Q9UN30 329 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 RAXQ9Y2V3 346 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 NUMA1Q14980 2115 aa12.32□□□□□ -0.44
CARMIL3-204ENST00000561354 CABIN1Q9Y6J0 2220 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 TRABD2BA6NFA1 517 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 O00370 1275 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 IRAK2O43187 625 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 FSBPO95073 299 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms