RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SPTLC3Q9NUV7 552 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 HAUS2Q9NVX0 235 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 TAS2R14Q9NYV8 317 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 KIAA1522Q9P206 1035 aaPredicted RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 TMEM59LQ9UK28 342 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 HCN4Q9Y3Q4 1203 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
TPM1-229ENST00000561242 PCDHA13Q9Y5I0 950 aa11.09□□□□□ -0.63
TPM1-229ENST00000561242 C2CD4BA6NLJ0 364 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 EIF3CLB5ME19 914 aaKnown RBP11.08□□□□□ -0.64
TPM1-229ENST00000561242 TRDMT1O14717 391 aaKnown RBP11.08□□□□□ -0.64
TPM1-229ENST00000561242 HOXC11O43248 304 aaPredicted RBP11.08□□□□□ -0.64
TPM1-229ENST00000561242 SPOPO43791 374 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 CREB3O43889 395 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 GPR37L1O60883 481 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 CLDN11O75508 207 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 NEBLO76041 1014 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 CYP17A1P05093 508 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 KRT7P08729 469 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 FLT3P36888 993 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 ETFBP38117 255 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 ARHGAP25P42331 645 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 TNFRSF4P43489 277 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 CXCR3P49682 368 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 PGFP49763 221 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 ZNF135P52742 658 aaPredicted RBP11.08□□□□□ -0.64
TPM1-229ENST00000561242 VCPP55072 806 aaKnown RBP11.08□□□□□ -0.64
TPM1-229ENST00000561242 KDSRQ06136 332 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 MESDQ14696 234 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 STARD3Q14849 445 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 CCDC14Q49A88 953 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 EOGTQ5NDL2 527 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 C6orf118Q5T5N4 469 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 HGSNATQ68CP4 663 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 PLEKHA7Q6IQ23 1121 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 RHBDF2Q6PJF5 856 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 ANKS1BQ7Z6G8 1248 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 FAM131BQ86XD5 332 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 PGBD3Q8N328 593 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 PAF1Q8N7H5 531 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 TC2NQ8N9U0 490 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 RSPRY1Q96DX4 576 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 PGAP3Q96FM1 320 aaPredicted RBP11.08□□□□□ -0.64
TPM1-229ENST00000561242 C1orf74Q96LT6 269 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 EIF3CQ99613 913 aaKnown RBP11.08□□□□□ -0.64
TPM1-229ENST00000561242 CHP1Q99653 195 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 MUC3BQ9H195 1237 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 POLMQ9NP87 494 aaPredicted RBP11.08□□□□□ -0.64
TPM1-229ENST00000561242 LTB4R2Q9NPC1 389 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 PLK2Q9NYY3 685 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 PCSK1NQ9UHG2 260 aa11.08□□□□□ -0.64
TPM1-229ENST00000561242 PLXNA3P51805 1871 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 TMEM191CA6NGB0 347 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 NPC1O15118 1278 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 ATMINO43313 823 aaPredicted RBP11.07□□□□□ -0.64
TPM1-229ENST00000561242 KRT86O43790 486 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 PAGE1O75459 146 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 GABBR2O75899 941 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 KAT7O95251 611 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 NDUFA10O95299 355 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 CYP1A2P05177 515 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 CD72P21854 359 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 MSNP26038 577 aaKnown RBP11.07□□□□□ -0.64
TPM1-229ENST00000561242 OR1E1P30953 314 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 ADRA1BP35368 520 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 GJC1P36383 396 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 SLC1A1P43005 524 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 SOX9P48436 509 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 NUBP1P53384 320 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 NRLP54845 237 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 SEC13P55735 322 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 SULT2A1Q06520 285 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 SFSWAPQ12872 951 aaKnown RBP11.07□□□□□ -0.64
TPM1-229ENST00000561242 SLC12A1Q13621 1099 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 DMC1Q14565 340 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 C15orf59Q2T9L4 293 aaPredicted RBP11.07□□□□□ -0.64
TPM1-229ENST00000561242 HSF5Q4G112 596 aaPredicted RBP11.07□□□□□ -0.64
TPM1-229ENST00000561242 MS4A13Q5J8X5 152 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 ERMARDQ5T6L9 678 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 RFWD3Q6PCD5 774 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 Q6ZNB5 142 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 BMP8AQ7Z5Y6 402 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 SYCE1Q8N0S2 351 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 KCTD6Q8NC69 237 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 JOSD2Q8TAC2 188 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 KCNV2Q8TDN2 545 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.07□□□□□ -0.64
TPM1-229ENST00000561242 FNIP1Q8TF40 1166 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 NSMCE1Q8WV22 266 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 TBC1D31Q96DN5 1066 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 LRRC3BQ96PB8 259 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 ZYG11BQ9C0D3 744 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 DHX35Q9H5Z1 703 aaKnown RBP11.07□□□□□ -0.64
TPM1-229ENST00000561242 RETREG1Q9H6L5 497 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 HPS4Q9NQG7 708 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 PIGVQ9NUD9 493 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 BCCIPQ9P287 314 aaKnown RBP eCLIP11.07□□□□□ -0.64
TPM1-229ENST00000561242 OR12D3Q9UGF7 316 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 SLC25A13Q9UJS0 675 aa11.07□□□□□ -0.64
TPM1-229ENST00000561242 VANGL2Q9ULK5 521 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms