RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ZFPM1Q8IX07 1006 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 FAM126BQ8IXS8 530 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CRIPAKQ8N1N5 446 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 HDDC3Q8N4P3 179 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 FITM2Q8N6M3 262 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PTGR2Q8N8N7 351 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 FAM181AQ8N9Y4 354 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 DENND6BQ8NEG7 585 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 NEK11Q8NG66 645 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TBC1D15Q8TC07 691 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 BICD2Q8TD16 824 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 BPIFB1Q8TDL5 484 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 FAM216AQ8WUB2 273 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CNOT9Q92600 299 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 ALG3Q92685 438 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 HOXB13Q92826 284 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 SCAMP4Q969E2 229 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SLC22A18Q96BI1 424 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PTERQ96BW5 349 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 INTS12Q96CB8 462 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 HDAC11Q96DB2 347 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PGAM5Q96HS1 289 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 FAM46AQ96IP4 442 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 HRASLS5Q96KN8 279 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PPP1R13BQ96KQ4 1090 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 FAM227BQ96M60 508 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 KLHL15Q96M94 604 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SLC46A1Q96NT5 459 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CLIC6Q96NY7 704 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 LENG8Q96PV6 779 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 ALPK1Q96QP1 1244 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 MED15Q96RN5 788 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 WRNIP1Q96S55 665 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ABHD1Q96SE0 405 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TMEM209Q96SK2 561 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 RUFY1Q96T51 708 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TACO1Q9BSH4 297 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 MRI1Q9BV20 369 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SPATA5L1Q9BVQ7 753 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 COL25A1Q9BXS0 654 aaPredicted RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 SLC46A2Q9BY10 475 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 IFIH1Q9BYX4 1025 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 CLPBQ9H078 707 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 USP44Q9H0E7 712 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 VPS37BQ9H9H4 285 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PDE11AQ9HCR9 933 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ATP13A1Q9HD20 1204 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 XPNPEP3Q9NQH7 507 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 DLL4Q9NR61 685 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 POLE3Q9NRF9 147 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ANO10Q9NW15 660 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 COMMD8Q9NX08 183 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 MCM9Q9NXL9 1143 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 KCTD5Q9NXV2 234 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ACTR3BQ9P1U1 418 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TRPC4Q9UBN4 977 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 Q9UFV3 132 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 TRPS1Q9UHF7 1281 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 GPR160Q9UJ42 338 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ZFP69BQ9UJL9 534 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SLC25A13Q9UJS0 675 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 HPCAL4Q9UM19 191 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CAPN11Q9UMQ6 739 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 ITM2BQ9Y287 266 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 PTRH2Q9Y3E5 179 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 PCDHA10Q9Y5I2 948 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SNX11Q9Y5W9 270 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 CDY1Q9Y6F8 540 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 RUSC2Q8N2Y8 1516 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 SPAG9O60271 1321 aaKnown RBP2.15□□□□□ -2.07
RTF1-207ENST00000561076 ADGRF5Q8IZF2 1346 aa2.15□□□□□ -2.07
RTF1-207ENST00000561076 A0A087WZ62 844 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 CCDC187A0A096LP49 1063 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 CLRN2A0PK11 232 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FITM1A5D6W6 292 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A18PA6NE21 464 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A16PA6NEW6 464 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 URADA6NGE7 173 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 AGAP5A6NIR3 686 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM170BA6NMN3 283 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A9PA6NNJ1 464 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 CCDC169A6NNP5 214 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A5PA8MXJ8 464 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 GPR89AB7ZAQ6 455 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 PSMD9O00233 223 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 POLRMTO00411 1230 aaKnown RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 IKBKBO14920 756 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TP73O15350 636 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ST8SIA5O15466 376 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ASAP2O43150 1006 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 STRNO43815 780 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 KIF5CO60282 957 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 HBP1O60381 514 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 GFRA3O60609 400 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 KINO60870 393 aaKnown RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 HSF2BPO75031 334 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 AVILO75366 819 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 NDUFS3O75489 264 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TAF5LO75529 589 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms