RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	CHST8	Q9H2A9	424 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	ZNF287	Q9HBT7	754 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	THSD1	Q9NS62	852 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	DNAJB11	Q9UBS4	358 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	DKK4	Q9UBT3	224 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	PCDHGB6	Q9Y5F9	930 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532		F8W8V4	182 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	BTF3	P20290	206 aa	Known RBP	4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	RBL1	P28749	1068 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	IDUA	P35475	653 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	VPS41	P49754	854 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	COPA	P53621	1224 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	RAE1	P78406	368 aa	Known RBP	4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	DNASE1L3	Q13609	305 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	CNGA3	Q16281	694 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	MRGPRG-AS1	Q2M3A8	158 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	YAF2	Q8IY57	180 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	FSTL5	Q8N475	847 aa	Predicted RBP	4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	LPAR1	Q92633	364 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	STRBP	Q96SI9	672 aa	Known RBP	4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	NUP62CL	Q9H1M0	184 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	FAM83D	Q9H4H8	585 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	ZNF556	Q9HAH1	456 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	ITGB1BP2	Q9UKP3	347 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	CAPN11	Q9UMQ6	739 aa		4.08	□□□□□ -1.76
SLTM-223	ENST00000560532	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	PRPF4	O43172	522 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	TFEB	P19484	476 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	ERVFC1-1	P60608	527 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	CLCA4	Q14CN2	919 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	SMTNL2	Q2TAL5	461 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	FAM76B	Q5HYJ3	339 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	MANEAL	Q5VSG8	457 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	PLAG1	Q6DJT9	500 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	HIST2H2BC	Q6DN03	193 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	PPP4R4	Q6NUP7	873 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	UEVLD	Q8IX04	471 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	P2RY11	Q96G91	374 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	APOL5	Q9BWW9	433 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	SEZ6L	Q9BYH1	1024 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	UNK	Q9C0B0	810 aa	Known RBP	4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	AGO2	Q9UKV8	859 aa	Known RBP	4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	HPSE	Q9Y251	543 aa		4.07	□□□□□ -1.76
SLTM-223	ENST00000560532	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	KIF3B	O15066	747 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	MT-ND5	P03915	603 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	CHRNB1	P11230	501 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	SLC5A1	P13866	664 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	PKM	P14618	531 aa	Known RBP	4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	CARS	P49589	748 aa	Known RBP	4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	WASHC2D	Q5SRD0	308 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	PRSS57	Q6UWY2	283 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	UNC13D	Q70J99	1090 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	CELF1	Q92879	486 aa	Known RBP	4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	SNX22	Q96L94	193 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	PIMREG	Q9BSJ6	248 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	SARG	Q9BW04	601 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	GATA5	Q9BWX5	397 aa	Predicted RBP	4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	TM6SF1	Q9BZW5	370 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	ASNSD1	Q9NWL6	643 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	VPS51	Q9UID3	782 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532	PCDHB2	Q9Y5E7	798 aa		4.06	□□□□□ -1.76
SLTM-223	ENST00000560532		A6NNC1	897 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	WDR47	O94967	919 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	TRIM27	P14373	513 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	HTR7	P34969	479 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	PIK3CB	P42338	1070 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	CASP5	P51878	434 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	ART1	P52961	327 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	MTAP	Q13126	283 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	GAB1	Q13480	694 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	DAG1	Q14118	895 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	MZT2A	Q6P582	158 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	RNF152	Q8N8N0	203 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	PHF21B	Q96EK2	531 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	ZDHHC12	Q96GR4	267 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	SELENOO	Q9BVL4	669 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	ZCWPW1	Q9H0M4	648 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	AAMDC	Q9H7C9	122 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	ABHD10	Q9NUJ1	306 aa		4.05	□□□□□ -1.76
SLTM-223	ENST00000560532	COL15A1	P39059	1388 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532		A0A1B0GUV1	79 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	RHPN2P1	A8MT19	583 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	PRY	O14603	147 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	PQBP1	O60828	265 aa	Known RBP	4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	INMT	O95050	263 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	IL18RAP	O95256	599 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	ANXA2	P07355	339 aa	Known RBP	4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	UMOD	P07911	640 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	SOX2	P48431	317 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	CXCR3	P49682	368 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	ZNF543	Q08ER8	600 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	DLGAP5	Q15398	846 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	SDR16C5	Q8N3Y7	309 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	EME1	Q96AY2	570 aa		4.04	□□□□□ -1.76
SLTM-223	ENST00000560532	TTLL2	Q9BWV7	592 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms