RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 RDXP35241 583 aaKnown RBP14.64□□□□□ -0.07
TPM1-223ENST00000560445 USP8P40818 1118 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 PTGER3P43115 390 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 GPD2P43304 727 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 RPL34P49207 117 aaKnown RBP14.64□□□□□ -0.07
TPM1-223ENST00000560445 OXCT1P55809 520 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 ST8SIA6P61647 398 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 PTK2Q05397 1052 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 HNRNPDQ14103 355 aaKnown RBP14.64□□□□□ -0.07
TPM1-223ENST00000560445 MAN2A1Q16706 1144 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 FUT11Q495W5 492 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 KIAA1211LQ6NV74 962 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 CADM4Q8NFZ8 388 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 ZNF606Q8WXB4 792 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 NDRG1Q92597 394 aaKnown RBP14.64□□□□□ -0.07
TPM1-223ENST00000560445 KAT5Q92993 513 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 HSPA12BQ96MM6 686 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 KREMEN1Q96MU8 473 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 CLSTN2Q9H4D0 955 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 POPDC2Q9HBU9 364 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 TJP2Q9UDY2 1190 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 GGA2Q9UJY4 613 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 ANGPTL2Q9UKU9 493 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 DNAH14Q0VDD8 3507 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 MEI4A8MW99 385 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 MSI1O43347 362 aaKnown RBP14.63□□□□□ -0.07
TPM1-223ENST00000560445 TSPAN3O60637 253 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 KCNK5O95279 499 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 TPM2P07951 284 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 DLDP09622 509 aaKnown RBP14.63□□□□□ -0.07
TPM1-223ENST00000560445 CEACAM1P13688 526 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 IL12RB1P42701 662 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 NOVA1P51513 510 aaKnown RBP14.63□□□□□ -0.07
TPM1-223ENST00000560445 YWHAZP63104 245 aaKnown RBP14.63□□□□□ -0.07
TPM1-223ENST00000560445 CDH18Q13634 790 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 TTC31Q49AM3 519 aaPredicted RBP14.63□□□□□ -0.07
TPM1-223ENST00000560445 EFHC1Q5JVL4 640 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 TTC39BQ5VTQ0 682 aaPredicted RBP14.63□□□□□ -0.07
TPM1-223ENST00000560445 CHST9Q7L1S5 443 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 TMEM110Q86TL2 294 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 TMPRSS6Q8IU80 811 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 MFN1Q8IWA4 741 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 RGL4Q8IZJ4 473 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 OR2T3Q8NH03 318 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 DQX1Q8TE96 717 aaKnown RBP14.63□□□□□ -0.07
TPM1-223ENST00000560445 NUP58Q9BVL2 599 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 SLC4A5Q9BY07 1137 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 NUP62CLQ9H1M0 184 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 CD248Q9HCU0 757 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 ITM2CQ9NQX7 267 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 ABCB8Q9NUT2 735 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 ASNSD1Q9NWL6 643 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 USP36Q9P275 1121 aaKnown RBP14.63□□□□□ -0.07
TPM1-223ENST00000560445 SUN2Q9UH99 717 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 HCN2Q9UL51 889 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 RAD54BQ9Y620 910 aa14.63□□□□□ -0.07
TPM1-223ENST00000560445 TNRC6BQ9UPQ9 1833 aaKnown RBP14.63□□□□□ -0.07
TPM1-223ENST00000560445 CEP192Q8TEP8 1941 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 TPRP12270 2363 aaKnown RBP14.62□□□□□ -0.07
TPM1-223ENST00000560445 PI4KAP42356 2102 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 ANTXRLA6NF34 631 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 ACACBO00763 2458 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 TBL1XO60907 577 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 RNASEH1O60930 286 aaKnown RBP14.62□□□□□ -0.07
TPM1-223ENST00000560445 IGLV3-19P01714 112 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 ENGP17813 658 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 ITPKAP23677 461 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 KRT9P35527 623 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 IRX4P78413 519 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 CDK17Q00537 523 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 PDCLQ13371 301 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 CKAP5Q14008 2032 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 PIK3R6Q5UE93 754 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 LRSAM1Q6UWE0 723 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 ZDHHC17Q8IUH5 632 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 SCUBE3Q8IX30 993 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 ATP6V0D2Q8N8Y2 350 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 KDM1BQ8NB78 822 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 MSANTD4Q8NCY6 345 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 SHC3Q92529 594 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 ZNF419Q96HQ0 510 aaPredicted RBP14.62□□□□□ -0.07
TPM1-223ENST00000560445 BTN2A3PQ96KV6 586 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 CRACR2AQ9BSW2 395 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 SYNCQ9H7C4 482 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 RXFP3Q9NSD7 469 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.62□□□□□ -0.07
TPM1-223ENST00000560445 SCML1Q9UN30 329 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 PCDHGC3Q9UN70 934 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 PAXBP1Q9Y5B6 917 aa14.62□□□□□ -0.07
TPM1-223ENST00000560445 UPK3BL1B0FP48 263 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 UPK3BL2E5RIL1 263 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 PIK3R2O00459 728 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 OPHN1O60890 802 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 HSF2BPO75031 334 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 ABCB4P21439 1286 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 HLA-FP30511 346 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 NNMTP40261 264 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 SLC14A1Q13336 389 aa14.61□□□□□ -0.07
TPM1-223ENST00000560445 CAMK2GQ13555 558 aaPredicted RBP14.61□□□□□ -0.07
TPM1-223ENST00000560445 SLC12A1Q13621 1099 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms