RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ULBP1Q9BZM6 244 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 ZDHHC5Q9C0B5 715 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 PRDM16Q9HAZ2 1276 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 LRRC4Q9HBW1 653 aa14.17□□□□□ -0.14
SMAD3-214ENST00000560402 DNAAF2Q9NVR5 837 aaKnown RBP14.17□□□□□ -0.14
SMAD3-214ENST00000560402 ZFHX4Q86UP3 3567 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 H0Y626 953 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 SYNCRIPO60506 623 aaKnown RBP14.16□□□□□ -0.14
SMAD3-214ENST00000560402 TRIM16O95361 564 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 VDRP11473 427 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 OXTRP30559 389 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 RDXP35241 583 aaKnown RBP14.16□□□□□ -0.14
SMAD3-214ENST00000560402 IL12RB1P42701 662 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 HARS2P49590 506 aaKnown RBP14.16□□□□□ -0.14
SMAD3-214ENST00000560402 PDE4CQ08493 712 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 ZNF234Q14588 700 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 MPPE1Q53F39 396 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 SPECC1LQ69YQ0 1117 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 FOXR2Q6PJQ5 311 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 BHLHA9Q7RTU4 235 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 DENND1CQ8IV53 801 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 LRRC8AQ8IWT6 810 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 RGL4Q8IZJ4 473 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 SIX6OS1Q8N1H7 587 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 CADM4Q8NFZ8 388 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 WFIKKN2Q8TEU8 576 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 RNF139Q8WU17 664 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 IRX2Q9BZI1 471 aaPredicted RBP14.16□□□□□ -0.14
SMAD3-214ENST00000560402 HSD3B7Q9H2F3 369 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 FBRSQ9HAH7 460 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 RTN4Q9NQC3 1192 aaKnown RBP14.16□□□□□ -0.14
SMAD3-214ENST00000560402 ELOVL2Q9NXB9 296 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 ARMCX3Q9UH62 379 aaPredicted RBP14.16□□□□□ -0.14
SMAD3-214ENST00000560402 STOML2Q9UJZ1 356 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 KIAA1257Q9ULG3 409 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 NEUROG3Q9Y4Z2 214 aa14.16□□□□□ -0.14
SMAD3-214ENST00000560402 A0A1B0GTH6 734 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 MEI4A8MW99 385 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 KCNJ18B7U540 433 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 TIMM44O43615 452 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 IGLV3-19P01714 112 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 ARID5AQ03989 594 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 ADIGQ0VDE8 80 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 TRIM14Q14142 442 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 KCNJ12Q14500 433 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 PLEKHG6Q3KR16 790 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 DNTTIP2Q5QJE6 756 aaKnown RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 DEFB119Q8N690 84 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 ZNF557Q8N988 423 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 KDF1Q8NAX2 398 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 DDI1Q8WTU0 396 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 KCTD13Q8WZ19 329 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 DNASE2BQ8WZ79 361 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 PRCCQ92733 491 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 TATDN2Q93075 761 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 SIPA1Q96FS4 1042 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 EEF2KMTQ96G04 330 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 P2RY11Q96G91 374 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 ZNF830Q96NB3 372 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 TMEM121BQ9BXQ6 578 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 PCED1AQ9H1Q7 454 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 METTL14Q9HCE5 456 aaKnown RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 CD93Q9NPY3 652 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 CNGB3Q9NQW8 809 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 ITM2CQ9NQX7 267 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 ABCC13Q9NSE7 274 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 SAMSN1Q9NSI8 373 aaKnown RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 WSB2Q9NYS7 404 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 LIMA1Q9UHB6 759 aaKnown RBP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.15□□□□□ -0.14
SMAD3-214ENST00000560402 CFAP47Q6ZTR5 3102 aa14.15□□□□□ -0.14
SMAD3-214ENST00000560402 CHD6Q8TD26 2715 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 A0A1B0GTW7 788 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 C1QTNF9BB2RNN3 333 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 WASH3PC4AMC7 463 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 O00370 1275 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 PMM2O15305 246 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 PAEPP09466 180 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 C1QTNF9P0C862 333 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 ACADMP11310 421 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 NCAM1P13591 858 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 CD19P15391 556 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 HOXD9P28356 352 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-214ENST00000560402 SIM1P81133 766 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-214ENST00000560402 STILQ15468 1287 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 ZNF423Q2M1K9 1284 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 MSANTD2Q6P1R3 559 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 SERPINA13PQ6UXR4 307 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 FMNL3Q8IVF7 1028 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 UBR7Q8N806 425 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 RBBP8NLQ8NC74 664 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-214ENST00000560402 KIAA1524Q8TCG1 905 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 IRGQQ8WZA9 623 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 GATA6Q92908 595 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 SLC35C1Q96A29 364 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 TOE1Q96GM8 510 aaKnown RBP14.14□□□□□ -0.15
SMAD3-214ENST00000560402 SCNM1Q9BWG6 230 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 CIPCQ9C0C6 399 aa14.14□□□□□ -0.15
SMAD3-214ENST00000560402 MKRN2Q9H000 416 aaKnown RBP14.14□□□□□ -0.15
SMAD3-214ENST00000560402 SLC6A17Q9H1V8 727 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms