RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 KCNB2Q92953 911 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 INVSQ9Y283 1065 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 TEX14Q8IWB6 1497 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 IRGMA1A4Y4 181 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 GRAP2O75791 330 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 DHFRP00374 187 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 GJA1P17302 382 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 POU5F1Q01860 360 aaKnown RBP14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 MARCH10Q8NA82 808 aaPredicted RBP14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 ACTR8Q9H981 624 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 ERGIC3Q9Y282 383 aa14.16□□□□□ -0.14
CSPG4P12-202ENST00000559989 RAD17O75943 681 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 CCR4P51679 360 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 DEPDC4Q8N2C3 294 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 TRPV1Q8NER1 839 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 BTBD10Q9BSF8 475 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 NAGPAQ9UK23 515 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 IFNA6P05013 189 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 ODC1P11926 461 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 ZNF37AP17032 561 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 CLK2P49760 499 aaKnown RBP14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 DENND5AQ6IQ26 1287 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 TMPRSS6Q8IU80 811 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 HERC6Q8IVU3 1022 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 OSBP2Q969R2 916 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 CHMP1AQ9HD42 196 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 CORO2BQ9UQ03 480 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 GRIP1Q9Y3R0 1128 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 CES2O00748 559 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 ATF4P18848 351 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 NPR2P20594 1047 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 TFDP3Q5H9I0 405 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 STOX1Q6ZVD7 989 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 SPATA5L1Q9BVQ7 753 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 CRYL1Q9Y2S2 319 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 PCDHA10Q9Y5I2 948 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 RAPGEF6Q8TEU7 1601 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 FDX1P10109 184 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 RAG1P15918 1043 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 ITIH1P19827 911 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 GJA8P48165 433 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 TMEM168Q9H0V1 697 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 ZNF224Q9NZL3 707 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 SHOC2Q9UQ13 582 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 TTLL13PA6NNM8 815 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 ARFIP1P53367 373 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 AADATQ8N5Z0 425 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 SUN5Q8TC36 379 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 CRISPLD1Q9H336 500 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 AAASQ9NRG9 546 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 EVA1BQ9NVM1 165 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 GLRBP48167 497 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 IST1P53990 364 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 TYSND1Q2T9J0 566 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 OAFQ86UD1 273 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 PACS2Q86VP3 889 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 ZNF615Q8N8J6 731 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 WDR24Q96S15 920 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 BARHL2Q9NY43 387 aa14.15□□□□□ -0.14
CSPG4P12-202ENST00000559989 C15orf38-AP3S2A0A0A6YYH1 394 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP27XA6NNY8 438 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 H7C4K7 107 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 PRKAB2O43741 272 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 COMTP21964 271 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 STRIP1Q5VSL9 837 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 ARPINQ7Z6K5 226 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF276Q8N554 614 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 PSMA8Q8TAA3 256 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 DLG3Q92796 817 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 CKLFQ9UBR5 152 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 DSEQ9UL01 958 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 TRIM38O00635 465 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 MUTP22033 750 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 CIAPIN1Q6FI81 312 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 OSGEPL1Q9H4B0 414 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 PLIN3O60664 434 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 PTGS2P35354 604 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 CACNB3P54284 484 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 MSLNQ13421 630 aaPredicted RBP14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 TCEA2Q15560 299 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 LRRC70Q7Z2Q7 622 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP38Q8NB14 1042 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 PLGRKTQ9HBL7 147 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 KCND2Q9NZV8 630 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 RPS6KA6Q9UK32 745 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 CDH9Q9ULB4 789 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 CCNT2O60583 730 aaKnown RBP14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 RECQL5O94762 991 aaPredicted RBP14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 COA1Q9GZY4 146 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 WDR19Q8NEZ3 1342 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 PGRMC2O15173 223 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 SEC24CP53992 1094 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 TUBA4AP68366 448 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 DALRD3Q5D0E6 543 aaKnown RBP14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 GRTP1Q5TC63 336 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 BTBD9Q96Q07 612 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 TCF7L2Q9NQB0 619 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 KDM5DQ9BY66 1539 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 RGSL1A5PLK6 1076 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms