RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 EDEM1Q92611 657 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 PGM2Q96G03 612 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 MSLNLQ96KJ4 702 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 SFXN1Q9H9B4 322 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 METTL5Q9NRN9 209 aaKnown RBP16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 STRIP2Q9ULQ0 834 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 NAALADL1Q9UQQ1 740 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 RRP15Q9Y3B9 282 aaKnown RBP16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 NEU2Q9Y3R4 380 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 UNC80Q8N2C7 3258 aa16.45■□□□□ 0.22
CDC42BPB-204ENST00000559043 COL6A3P12111 3177 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 TBX18O95935 607 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 KRT3P12035 628 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 TFE3P19532 575 aaPredicted RBP16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 YWHAGP61981 247 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 YWHAZP63104 245 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 ZNF252P-AS1Q0IIN9 211 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 SNX1Q13596 522 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 TAF12Q16514 161 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 LRRC38Q5VT99 294 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 CROCCP2Q86T23 111 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 ZDHHC17Q8IUH5 632 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 PPM1EQ8WY54 764 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 IRGQQ8WZA9 623 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 PABPC5Q96DU9 382 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 OSBPL8Q9BZF1 889 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 DZANK1Q9NVP4 752 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 BCCIPQ9P287 314 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 WDR35Q9P2L0 1181 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 R3HDM2Q9Y2K5 976 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 MYO16Q9Y6X6 1858 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 ANAPC1Q9H1A4 1944 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 RIPK2O43353 540 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 GAS8O95995 478 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 LTFP02788 710 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 MYL4P12829 197 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 FOSL2P15408 326 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 GABRR2P28476 465 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 CCT5P48643 541 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 SNX16P57768 344 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 MAGOHP61326 146 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 BYSLQ13895 437 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 RAB6CQ53S08 254 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 EFHC1Q5JVL4 640 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 STXBP5Q5T5C0 1151 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 DNAJC24Q6P3W2 148 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 GPR149Q86SP6 731 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 CCDC50Q8IVM0 306 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 DEFB106AQ8N104 65 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 FAM149B1Q96BN6 582 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 SNF8Q96H20 258 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 MCEEQ96PE7 176 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 RAB6CQ9H0N0 254 aa16.44■□□□□ 0.22
CDC42BPB-204ENST00000559043 A0A1W2PRU2 124 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 C2orf78A6NCI8 922 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 XYLBO75191 536 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 POU2F2P09086 479 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 PRSS36Q5K4E3 855 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 TRMT10CQ7L0Y3 403 aaKnown RBP16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 ANKS1BQ7Z6G8 1248 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 RCOR2Q8IZ40 523 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 ELMOD1Q8N336 334 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 NIPA2Q8N8Q9 360 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 SHKBP1Q8TBC3 707 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 SLITRK1Q96PX8 696 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 SLC2A13Q96QE2 648 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 SLC22A12Q96S37 553 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 RNF38Q9H0F5 515 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 CCSER2Q9H7U1 834 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 USTQ9Y2C2 406 aa16.43■□□□□ 0.22
CDC42BPB-204ENST00000559043 C2CD4BA6NLJ0 364 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 SCNN1AP37088 669 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 CYP4F8P98187 520 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 CAV1Q03135 178 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 SH3PXD2AQ5TCZ1 1133 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 SNX30Q5VWJ9 437 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 ITFG1Q8TB96 612 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 CYP2S1Q96SQ9 504 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 HEMGNQ9BXL5 484 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 ADAM7Q9H2U9 754 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 PIDD1Q9HB75 910 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 POPDC2Q9HBU9 364 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 ASAH2Q9NR71 780 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 ASIC3Q9UHC3 531 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 OBSL1O75147 1896 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 EBAG9O00559 213 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 NDUFAB1O14561 156 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 HOXB8P17481 243 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 ADCY2Q08462 1091 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 PIGHQ14442 188 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 PABPC1LQ4VXU2 614 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 ODF2Q5BJF6 829 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 UBAP2Q5T6F2 1119 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 OTUD1Q5VV17 481 aaPredicted RBP16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 TXNDC8Q6A555 127 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 RXFP2Q8WXD0 754 aa16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 RBM41Q96IZ5 413 aaKnown RBP16.42■□□□□ 0.22
CDC42BPB-204ENST00000559043 CFAP57Q96MR6 1250 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms