RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 PTP4A2Q12974 167 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 DPYSL3Q14195 570 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 ZNF618Q5T7W0 954 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 TRMT10BQ6PF06 316 aaKnown RBP12.51□□□□□ -0.41
SEC11A-206ENST00000558924 TREML1Q86YW5 311 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 CCDC97Q96F63 343 aaPredicted RBP12.51□□□□□ -0.41
SEC11A-206ENST00000558924 ANKRD27Q96NW4 1050 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 CDHR5Q9HBB8 845 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 ADARB2Q9NS39 739 aaKnown RBP12.51□□□□□ -0.41
SEC11A-206ENST00000558924 SENP1Q9P0U3 644 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 LRRC37AA6NMS7 1700 aa12.51□□□□□ -0.41
SEC11A-206ENST00000558924 C2CD2LO14523 706 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 APOL1O14791 398 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 DCXO43602 365 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 LMNAP02545 664 aaKnown RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 ASLP04424 464 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 ENO3P13929 434 aaPredicted RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 GCAP28676 217 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 OCRLQ01968 901 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 DSG1Q02413 1049 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 GBE1Q04446 702 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 MBTD1Q05BQ5 628 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 MED21Q13503 144 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 RAPH1Q70E73 1250 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 WDR75Q8IWA0 830 aaKnown RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 DEFB107AQ8IZN7 70 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 NAT14Q8WUY8 206 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 XYLT2Q9H1B5 865 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 PCDHGB4Q9UN71 923 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 MTO1Q9Y2Z2 717 aaKnown RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 MFHAS1Q9Y4C4 1052 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 PCDHGB5Q9Y5G0 923 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 C10orf71Q711Q0 1435 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 ATP9BO43861 1147 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 CYP2C9P11712 490 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 OLIG2Q13516 323 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 PDE1CQ14123 709 aaPredicted RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 LAYNQ6UX15 382 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 ARFGAP1Q8N6T3 406 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 GPRC5AQ8NFJ5 357 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 INPP5DQ92835 1189 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 SGF29Q96ES7 293 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 SCYL1Q96KG9 808 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 PEBP4Q96S96 227 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 LRRC4Q9HBW1 653 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 PCDH9Q9HC56 1237 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 PDP2Q9P2J9 529 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 ZNF112Q9UJU3 913 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 PDHXO00330 501 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 XPO1O14980 1071 aaKnown RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 ALOX15BO15296 676 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 LMO2P25791 158 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 KLRC2P26717 231 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 GLRBP48167 497 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 AP3M2P53677 418 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 PKNOX1P55347 436 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 TARBP2Q15633 366 aaKnown RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 GRIK4Q16099 956 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 RNASEH2BQ5TBB1 312 aaKnown RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 ST13P4Q8IZP2 240 aaPredicted RBP12.5□□□□□ -0.41
SEC11A-206ENST00000558924 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 SLC2A14Q8TDB8 520 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 DTNBP1Q96EV8 351 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 LGMNQ99538 433 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 KANSL3Q9P2N6 904 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 NUDT5Q9UKK9 219 aa12.5□□□□□ -0.41
SEC11A-206ENST00000558924 LTBP1Q14766 1721 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 CAPN15O75808 1086 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 TFDP2Q14188 446 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 KCTD21Q4G0X4 260 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 HEATR6Q6AI08 1181 aaKnown RBP12.49□□□□□ -0.41
SEC11A-206ENST00000558924 ZSCAN18Q8TBC5 510 aaPredicted RBP12.49□□□□□ -0.41
SEC11A-206ENST00000558924 C12orf42Q96LP6 360 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
SEC11A-206ENST00000558924 SEC24DO94855 1032 aaPredicted RBP12.49□□□□□ -0.41
SEC11A-206ENST00000558924 LSM8O95777 96 aaKnown RBP12.49□□□□□ -0.41
SEC11A-206ENST00000558924 ANPEPP15144 967 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 TYK2P29597 1187 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 CCNA1P78396 465 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 HPS6Q86YV9 775 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 ULK2Q8IYT8 1036 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 SNX31Q8N9S9 440 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 TMA16Q96EY4 203 aaKnown RBP12.49□□□□□ -0.41
SEC11A-206ENST00000558924 SNRNP25Q9BV90 132 aaKnown RBP12.49□□□□□ -0.41
SEC11A-206ENST00000558924 KLC2Q9H0B6 622 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 PDZD7Q9H5P4 517 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 ZNF358Q9NW07 568 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 SLC25A27O95847 323 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 TRUB2O95900 331 aaKnown RBP12.49□□□□□ -0.41
SEC11A-206ENST00000558924 ARL4AP40617 200 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 CCR3P51677 355 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 CTC1Q2NKJ3 1217 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 PPM1JQ5JR12 505 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 ILDR2Q71H61 639 aa12.49□□□□□ -0.41
SEC11A-206ENST00000558924 MARK2Q7KZI7 788 aaKnown RBP12.49□□□□□ -0.41
SEC11A-206ENST00000558924 PID1Q7Z2X4 250 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms