RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 CAPNS1P04632 268 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 CYP2C18P33260 490 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 GRIA1P42261 906 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 ARL4CP56559 192 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 CABP4P57796 275 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 UBE2SQ16763 222 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 LETM2Q2VYF4 491 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 TNNI3KQ59H18 835 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 Q5BKY6 102 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 GPR107Q5VW38 600 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 ALKBH5Q6P6C2 394 aaKnown RBP11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 ADAT2Q7Z6V5 191 aaKnown RBP11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 NT5DC3Q86UY8 548 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 CARM1Q86X55 608 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 MICU3Q86XE3 530 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 CCDC89Q8N998 374 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 HM13Q8TCT9 377 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 LPPQ93052 612 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 NKD2Q969F2 451 aaPredicted RBP11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 FAM149B1Q96BN6 582 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 TSEN34Q9BSV6 310 aaKnown RBP11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 GCOM2Q9BZD3 368 aaPredicted RBP11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 PLSCR3Q9NRY6 295 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 MYRFQ9Y2G1 1151 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 KIF1BO60333 1816 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 PI4K2BG5E9Z4 385 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 CD4P01730 458 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 HMGN1P05114 100 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 PSMA3P25788 255 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 RFC4P35249 363 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 HTR2BP41595 481 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 MRPS15P82914 257 aaKnown RBP11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 NME3Q13232 169 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 PPP1R3AQ16821 1122 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 MDH1BQ5I0G3 518 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 ORAI2Q96SN7 254 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 GDF15Q99988 308 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 STN1Q9H668 368 aaKnown RBP11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 PARVAQ9NVD7 372 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 KLF2Q9Y5W3 355 aaPredicted RBP11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 CCDC88AQ3V6T2 1871 aa11.33□□□□□ -0.6
SEMA4B-204ENST00000558065 MRC1P22897 1456 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 MEI4A8MW99 385 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 CLDN25C9JDP6 229 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 PLK4O00444 970 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 TTC4O95801 387 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 SERPING1P05155 500 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 ZNF3P17036 446 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 CHRNB2P17787 502 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 KCNQ4P56696 695 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 EIF3EP60228 445 aaKnown RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 OCA2Q04671 838 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 CSTF3Q12996 717 aaKnown RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 ZNF846Q147U1 533 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 FIBCD1Q8N539 461 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 FOXJ1Q92949 421 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 NPLQ9BXD5 320 aaPredicted RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 IDI2Q9BXS1 227 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 AKIP1Q9NQ31 210 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 POLE4Q9NR33 117 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 SLC24A2Q9UI40 661 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 PSMD13Q9UNM6 376 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 LACTBL1A8MY62 500 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 RFPL2O75678 378 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 ESRRGP62508 458 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 NTRK3Q16288 839 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 SGCAQ16586 387 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 C12orf60Q5U649 245 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 SLC22A16Q86VW1 577 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 METTL22Q9BUU2 404 aaPredicted RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 NIFKQ9BYG3 293 aaKnown RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 FAM105AQ9NUU6 356 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 GTF2IRD1Q9UHL9 959 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 TAGLN3Q9UI15 199 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 RIMS3Q9UJD0 308 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 TINAGQ9UJW2 476 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 EDC4Q6P2E9 1401 aaKnown RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 TRPC5OSA6NMA1 111 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 A8MUA0 341 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 VWA5AO00534 786 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 PTP4A3O75365 173 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 MMP1P03956 469 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 KRT7P08729 469 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 EIF2AK2P19525 551 aaKnown RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 ITIH2P19823 946 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 PIK3R1P27986 724 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 OTUD4Q01804 1114 aaKnown RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 ACAP2Q15057 778 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 FAM182AQ5T1J6 154 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 TTC27Q6P3X3 843 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 MB21D2Q8IYB1 491 aaPredicted RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 HIPK4Q8NE63 616 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 CPNE5Q9HCH3 593 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 PKD2L2Q9NZM6 624 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 TRPM5Q9NZQ8 1165 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 ARPP21Q9UBL0 812 aaPredicted RBP11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 AP4S1Q9Y587 144 aa11.32□□□□□ -0.6
SEMA4B-204ENST00000558065 A0A1W2PRG0 241 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 CLRN2A0PK11 232 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 ARHGAP42A6NI28 874 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms