RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TRIM4Q9C037 500 aa13.35□□□□□ -0.27
PSEN1-219ENST00000556951 RBAKQ9NYW8 714 aaPredicted RBP13.35□□□□□ -0.27
PSEN1-219ENST00000556951 IL37Q9NZH6 218 aa13.35□□□□□ -0.27
PSEN1-219ENST00000556951 FNDC3AQ9Y2H6 1198 aaKnown RBP13.35□□□□□ -0.27
PSEN1-219ENST00000556951 RAD54BQ9Y620 910 aa13.35□□□□□ -0.27
PSEN1-219ENST00000556951 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
PSEN1-219ENST00000556951 A0A1B0GTW7 788 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 CLDN5O00501 218 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 TRIM66O15016 1216 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 NRDCO43847 1150 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 STX10O60499 249 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 NDUFS2O75306 463 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 CILPO75339 1184 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 LDHAP00338 332 aaKnown RBP13.34□□□□□ -0.27
PSEN1-219ENST00000556951 ZDHHC11BP0C7U3 371 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 HLA-EP13747 358 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 PTPN1P18031 435 aaKnown RBP13.34□□□□□ -0.27
PSEN1-219ENST00000556951 ANXA13P27216 316 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 VAMP7P51809 220 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 ARID5BQ14865 1188 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 SNRNP35Q16560 246 aaKnown RBP13.34□□□□□ -0.27
PSEN1-219ENST00000556951 FIGNQ5HY92 759 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 WDR45BQ5MNZ6 344 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 SYCP2LQ5T4T6 812 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 TCERG1LQ5VWI1 586 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 BTBD8Q5XKL5 378 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 GPD1LQ8N335 351 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 RDH13Q8NBN7 331 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 TMC2Q8TDI7 906 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 SETD7Q8WTS6 366 aaKnown RBP13.34□□□□□ -0.27
PSEN1-219ENST00000556951 B3GNT5Q9BYG0 378 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 EDEM3Q9BZQ6 932 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 ZNF518BQ9C0D4 1074 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 GAREM1Q9H706 876 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 CCSER2Q9H7U1 834 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 ITM2CQ9NQX7 267 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 TM7SF3Q9NS93 570 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 EHD2Q9NZN4 543 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 BTBD3Q9Y2F9 522 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 SIK3Q9Y2K2 1263 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 ZKSCAN5Q9Y2L8 839 aa13.34□□□□□ -0.27
PSEN1-219ENST00000556951 KNL1Q8NG31 2342 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 A0A1W2PQJ5 194 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 GTPBP10A4D1E9 387 aaKnown RBP13.33□□□□□ -0.28
PSEN1-219ENST00000556951 FAM149AA5PLN7 773 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 ZNF233A6NK53 670 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 TULP1O00294 542 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-219ENST00000556951 CST3P01034 146 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-219ENST00000556951 GNSP15586 552 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 YWHAQP27348 245 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 CD6P30203 668 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 GNL1P36915 607 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-219ENST00000556951 HLA-BQ31612 363 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 ANO4Q32M45 955 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 PKDCCQ504Y2 493 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 DCAF17Q5H9S7 520 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-219ENST00000556951 GRAMD4Q6IC98 578 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 PAQR9Q6ZVX9 377 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 HTR3DQ70Z44 454 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 ZSCAN30Q86W11 494 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 CNGA4Q8IV77 575 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 CHPFQ8IZ52 775 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 SCAMP5Q8TAC9 235 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 CPLX3Q8WVH0 158 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 TOE1Q96GM8 510 aaKnown RBP13.33□□□□□ -0.28
PSEN1-219ENST00000556951 SLITRK1Q96PX8 696 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 PANX2Q96RD6 677 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 KCNK16Q96T55 309 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 KCNF1Q9H3M0 494 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 DPEP3Q9H4B8 488 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 PRDM16Q9HAZ2 1276 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 USP36Q9P275 1121 aaKnown RBP13.33□□□□□ -0.28
PSEN1-219ENST00000556951 FBXO10Q9UK96 956 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 CAPN11Q9UMQ6 739 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 PCDHGB2Q9Y5G2 931 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 SLCO1B1Q9Y6L6 691 aa13.33□□□□□ -0.28
PSEN1-219ENST00000556951 KNTC1P50748 2209 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 FAM92AA1XBS5 289 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 METTL12A8MUP2 240 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 GFRA2O00451 464 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 PMM2O15305 246 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 CACNG3O60359 315 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 TACC1O75410 805 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 GYPCP04921 128 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 FAM163BP0C2L3 166 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 TMEM191BP0C7N4 346 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 CASP14P31944 242 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 GTF2H1P32780 548 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 ADKP55263 362 aaKnown RBP13.32□□□□□ -0.28
PSEN1-219ENST00000556951 CYP24A1Q07973 514 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 KCNMA1Q12791 1236 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 IFRD2Q12894 506 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-219ENST00000556951 LRMPQ12912 555 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 UBAP2LQ14157 1087 aaKnown RBP13.32□□□□□ -0.28
PSEN1-219ENST00000556951 PREPLQ4J6C6 727 aaPredicted RBP13.32□□□□□ -0.28
PSEN1-219ENST00000556951 HECTD3Q5T447 861 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 GBP6Q6ZN66 633 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 NUDT18Q6ZVK8 323 aa13.32□□□□□ -0.28
PSEN1-219ENST00000556951 CBWD2Q8IUF1 395 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms