RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 RAPGEFL1Q9UHV5 662 aa25.49■■□□□ 1.67
SDR39U1-221ENST00000556707 TRIM24O15164 1050 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 FTLP02792 175 aaPredicted RBP25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 CISD3P0C7P0 127 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 PDGFRAP16234 1089 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 RRM1P23921 792 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 HOXD9P28356 352 aaPredicted RBP25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 CXCR3P49682 368 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 MTA1Q13330 715 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 BRMS1LQ5PSV4 323 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 SND1Q7KZF4 910 aaKnown RBP eCLIP25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 BNIPLQ7Z465 357 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 SFTPA1Q8IWL2 248 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 TERB1Q8NA31 727 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 ARHGAP20Q9P2F6 1191 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 ADAMTS1Q9UHI8 967 aa25.48■■□□□ 1.67
SDR39U1-221ENST00000556707 TBC1D3BA6NDS4 549 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 LAMTOR5O43504 91 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 SDC4P31431 198 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 RFC1P35251 1148 aaPredicted RBP25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 TNFRSF4P43489 277 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 DGKGP49619 791 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 SGSHP51688 502 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 TCF15Q12870 199 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 TBX2Q13207 712 aaPredicted RBP25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 ANGPT1Q15389 498 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 MPP7Q5T2T1 576 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 WDR59Q6PJI9 974 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 NUDT18Q6ZVK8 323 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 TMC6Q7Z403 805 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 SLC2A11Q9BYW1 496 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 PAXBP1Q9Y5B6 917 aa25.47■■□□□ 1.67
SDR39U1-221ENST00000556707 FANCMQ8IYD8 2048 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 DOCK4Q8N1I0 1966 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 MFAP3LO75121 409 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 ENDOD1O94919 500 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 PTPN9P43378 593 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 ZNF75DP51815 510 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 ATP11AP98196 1134 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 TSR1Q2NL82 804 aaKnown RBP25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 CCDC14Q49A88 953 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 MS4A13Q5J8X5 152 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 PPP1R15BQ5SWA1 713 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 RNF43Q68DV7 783 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 PKN3Q6P5Z2 889 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 CHSY1Q86X52 802 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 DNAAF5Q86Y56 855 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 HJURPQ8NCD3 748 aaPredicted RBP25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 PRICKLE1Q96MT3 831 aaPredicted RBP25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 ISCUQ9H1K1 167 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 WDCPQ9H6R7 721 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 ZNHIT6Q9NWK9 470 aaKnown RBP25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 ARHGEF38Q9NXL2 777 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 SLC27A6Q9Y2P4 619 aa25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 ARIH1Q9Y4X5 557 aaPredicted RBP25.46■■□□□ 1.67
SDR39U1-221ENST00000556707 CHURC1-FNTBB4DL54 471 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 ATG13O75143 517 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 ADCY5O95622 1261 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 TACR2P21452 398 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 RDXP35241 583 aaKnown RBP25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 CCR3P51677 355 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 ATXN1P54253 815 aaKnown RBP25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 RAP1GAP2Q684P5 730 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 PLEKHA7Q6IQ23 1121 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 MAML2Q8IZL2 1156 aaPredicted RBP25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 LGI2Q8N0V4 545 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 RPLP0P6Q8NHW5 317 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 USP33Q8TEY7 942 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 MRFAP1L1Q96HT8 127 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 PRMT1Q99873 361 aaKnown RBP25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 PRMT8Q9NR22 394 aaPredicted RBP25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 ABHD10Q9NUJ1 306 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 PARVAQ9NVD7 372 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 CLEC4EQ9ULY5 219 aa25.45■■□□□ 1.66
SDR39U1-221ENST00000556707 A0A087X0T9 212 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 TYW5A2RUC4 315 aaKnown RBP25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 ANKRD62A6NC57 917 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 TBL1XO60907 577 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 FAM228BP0C875 321 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 CHRM1P11229 460 aaPredicted RBP25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 GPD1P21695 349 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 EIF4A3P38919 411 aaKnown RBP25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 CXCL12P48061 93 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 PTPN5P54829 565 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 ADKP55263 362 aaKnown RBP25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 SEC13P55735 322 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 RPL7AP62424 266 aaKnown RBP25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 RPS24P62847 133 aaKnown RBP25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 MRPS21P82921 87 aaKnown RBP25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 MAMLD1Q13495 774 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 C15orf59Q2T9L4 293 aaPredicted RBP25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 C10orf76Q5T2E6 689 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 CNGA4Q8IV77 575 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 CENPIQ92674 756 aaPredicted RBP25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 MYEOVQ96EZ4 313 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 TRIM11Q96F44 468 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 MCEEQ96PE7 176 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 TKTL2Q9H0I9 626 aa25.44■■□□□ 1.66
SDR39U1-221ENST00000556707 FBXO4Q9UKT5 387 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms