RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 YWHAGP61981 247 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 RPS14P62263 151 aaKnown RBP11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 PKP1Q13835 747 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 ZNF394Q53GI3 561 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 KCNT1Q5JUK3 1230 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 PRAMEF14Q5SWL7 426 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 PPP1R26Q5T8A7 1209 aaPredicted RBP11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 GATAD2AQ86YP4 633 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 SLC9A9Q8IVB4 645 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 GOLGA1Q92805 767 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 PLD4Q96BZ4 506 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 TMA16Q96EY4 203 aaKnown RBP11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 NIF3L1Q9GZT8 377 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 TMEM245Q9H330 911 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 PRSS16Q9NQE7 514 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 ABCB8Q9NUT2 735 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 FAM13BQ9NYF5 915 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 SUN2Q9UH99 717 aa11.91□□□□□ -0.5
CCDC85C-205ENST00000556348 CELSR3Q9NYQ7 3312 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 ENC1O14682 589 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 ATXN7O15265 892 aaPredicted RBP11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 ATP5BP06576 529 aaKnown RBP11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 CDK4P11802 303 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 HOXD9P28356 352 aaPredicted RBP11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 HLA-FP30511 346 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 GCLMP48507 274 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 VAMP7P51809 220 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 RACK1P63244 317 aaKnown RBP11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 MBLAC2Q68D91 279 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 ZNF776Q68DI1 518 aaPredicted RBP11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 KIAA0895LQ68EN5 471 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 FMNL3Q8IVF7 1028 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 CEP57L1Q8IYX8 460 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 RNF139Q8WU17 664 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 CNDP2Q96KP4 475 aaKnown RBP11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 MMRN2Q9H8L6 949 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 APOBEC3GQ9HC16 384 aaKnown RBP11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 EXOC1Q9NV70 894 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 GGA2Q9UJY4 613 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 ZDHHC9Q9Y397 364 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 PCDHGA1Q9Y5H4 931 aa11.9□□□□□ -0.5
CCDC85C-205ENST00000556348 LOC400499M0QZD8 3231 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 A0A1B0GTQ1 180 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 PDXKO00764 312 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 VILLO15195 856 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 RNASEH1O60930 286 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 RFPL3O75679 317 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 DLDP09622 509 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 C1SP09871 688 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 PABPC1P11940 636 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 POLR2EP19388 210 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 EIF2S3P41091 472 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 TKTL1P51854 596 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 CLDN6P56747 220 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 ZNF445P59923 1031 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 PDE4CQ08493 712 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 SFSWAPQ12872 951 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 STK4Q13043 487 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 DNAJC3Q13217 504 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 TRIP4Q15650 581 aaPredicted RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 ZNF605Q86T29 641 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 ADIPOR2Q86V24 386 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 PIGZQ86VD9 579 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 FAM217AQ8IXS0 508 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 AHI1Q8N157 1196 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 TAS1R2Q8TE23 839 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 BAP1Q92560 729 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 SLC6A18Q96N87 628 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 FCRL3Q96P31 734 aaPredicted RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 ELF4Q99607 663 aaPredicted RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 UBXN6Q9BZV1 441 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 PRORYQ9H606 182 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 AASDHPPTQ9NRN7 309 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 OLA1Q9NTK5 396 aaKnown RBP11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 FBXL12Q9NXK8 326 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 RAI2Q9Y5P3 530 aa11.89□□□□□ -0.51
CCDC85C-205ENST00000556348 SMG1Q96Q15 3661 aaKnown RBP11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 A0A1W2PPC4 97 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 CBX4O00257 560 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 CAPN9O14815 690 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 PAPSS1O43252 624 aaPredicted RBP11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 CALUO43852 315 aaPredicted RBP11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 YEATS4O95619 227 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 ZBED1O96006 694 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 IGHV4-34P06331 123 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 ZSCAN22P10073 491 aaPredicted RBP11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 KRT13P13646 458 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 ST8SIA6P61647 398 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 TARDBPQ13148 414 aaKnown RBP eCLIP11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 C1orf220Q5T0J3 134 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 ADGRF1Q5T601 910 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 HES3Q5TGS1 186 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 USP30Q70CQ3 517 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 EID2Q8N6I1 236 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 KIAA0895Q8NCT3 520 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 TMEM174Q8WUU8 243 aa11.88□□□□□ -0.51
CCDC85C-205ENST00000556348 NDRG1Q92597 394 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms