RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ZBED1O96006 694 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 KLKB1P03952 638 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 CFIP05156 583 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 GABRG2P18507 467 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 ITPKAP23677 461 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 PMLP29590 882 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 CORO1AP31146 461 aaKnown RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 MAPK8P45983 427 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 TKTL1P51854 596 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 YWHAGP61981 247 aaKnown RBP eCLIP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 YWHAEP62258 255 aaKnown RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 STIM1Q13586 685 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 CUL2Q13617 745 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 MAP7D1Q3KQU3 841 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 SGO2Q562F6 1265 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 TRIM61Q5EBN2 209 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 N4BP2L1Q5TBK1 243 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 DAB2IPQ5VWQ8 1189 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 LYSMD4Q5XG99 296 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 ARHGAP17Q68EM7 881 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 KLHL10Q6JEL2 608 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 PSAPL1Q6NUJ1 521 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 KIAA1324Q6UXG2 1013 aaKnown RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 CLEC17AQ6ZS10 378 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 VASH1Q7L8A9 365 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 DENND1CQ8IV53 801 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 ARHGAP18Q8N392 663 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 ANKRD52Q8NB46 1076 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 UBA3Q8TBC4 463 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 NDRG1Q92597 394 aaKnown RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 FAXDC2Q96IV6 333 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 DUSP9Q99956 384 aaKnown RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 LSM14BQ9BX40 385 aaKnown RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 NUSAP1Q9BXS6 441 aaKnown RBP7.01□□□□□ -1.29
PSEN1-216ENST00000556066 ULBP1Q9BZM6 244 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 DCLK3Q9C098 648 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 LRRC4Q9HBW1 653 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 TMEM9BQ9NQ34 198 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 CLIC5Q9NZA1 410 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 MARK1Q9P0L2 795 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 CALCOCO1Q9P1Z2 691 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 TSPAN16Q9UKR8 245 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 HCN2Q9UL51 889 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 CYP8B1Q9UNU6 501 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 ZNF510Q9Y2H8 683 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 STARD13Q9Y3M8 1113 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 RAD54BQ9Y620 910 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 USP3Q9Y6I4 520 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 DMXL2Q8TDJ6 3036 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 PCNX2A6NKB5 2137 aa7.01□□□□□ -1.29
PSEN1-216ENST00000556066 CACNA1EQ15878 2313 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 A0A1W2PQF6 199 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 ANKRD62A6NC57 917 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 WASH3PC4AMC7 463 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 PIK3R2O00459 728 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 GIPC1O14908 333 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 XPO1O14980 1071 aaKnown RBP7□□□□□ -1.29
PSEN1-216ENST00000556066 AP5Z1O43299 807 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 LZTS3O60299 673 aaPredicted RBP7□□□□□ -1.29
PSEN1-216ENST00000556066 CYBBP04839 570 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 CISD3P0C7P0 127 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 LCP1P13796 627 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 CHKAP35790 457 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 NOVA1P51513 510 aaKnown RBP7□□□□□ -1.29
PSEN1-216ENST00000556066 ATXN3P54252 364 aaPredicted RBP7□□□□□ -1.29
PSEN1-216ENST00000556066 BCAT1P54687 386 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 LRRC63Q05C16 580 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 ADIGQ0VDE8 80 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 BST2Q10589 180 aaKnown RBP7□□□□□ -1.29
PSEN1-216ENST00000556066 CCDC40Q4G0X9 1142 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 RAB41Q5JT25 222 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 KIAA1211LQ6NV74 962 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 TMEM270Q6UE05 265 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 SLC36A4Q6YBV0 504 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 SYT12Q8IV01 421 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 FMNL3Q8IVF7 1028 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 SIX6OS1Q8N1H7 587 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 ZNF276Q8N554 614 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 PLPP7Q8NBV4 271 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 ENGASEQ8NFI3 743 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 IPO4Q8TEX9 1081 aaKnown RBP7□□□□□ -1.29
PSEN1-216ENST00000556066 DDI1Q8WTU0 396 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 RNF139Q8WU17 664 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 EDEM1Q92611 657 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 SLC35C1Q96A29 364 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 GTPBP2Q9BX10 602 aaKnown RBP7□□□□□ -1.29
PSEN1-216ENST00000556066 UBXN6Q9BZV1 441 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 SLC6A17Q9H1V8 727 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 TMEM74BQ9NUR3 256 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 ANGPTL2Q9UKU9 493 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 AGO1Q9UL18 857 aaKnown RBP7□□□□□ -1.29
PSEN1-216ENST00000556066 COQ4Q9Y3A0 265 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 PCDHB4Q9Y5E5 795 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 NUMA1Q14980 2115 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 CKAP5Q14008 2032 aa7□□□□□ -1.29
PSEN1-216ENST00000556066 KNL1Q8NG31 2342 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 IGHV1OR15-9A0A0B4J2B8 117 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 BIN1O00499 593 aa6.99□□□□□ -1.29
PSEN1-216ENST00000556066 CDX4O14627 284 aaPredicted RBP6.99□□□□□ -1.29
PSEN1-216ENST00000556066 SYNCRIPO60506 623 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms