RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PABPC5Q96DU9 382 aaKnown RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 MFSD3Q96ES6 412 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 NLRP4Q96MN2 994 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 SCLT1Q96NL6 688 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 CASD1Q96PB1 797 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 UHRF1Q96T88 793 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 SLC6A15Q9H2J7 730 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 TTC12Q9H892 705 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 MINDY3Q9H8M7 445 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 TUFT1Q9NNX1 390 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 ALG13Q9NP73 1137 aaKnown RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 CHST12Q9NRB3 414 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 ANKEF1Q9NU02 776 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 AGPAT5Q9NUQ2 364 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 SPTLC3Q9NUV7 552 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 TYW1Q9NV66 732 aaKnown RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 HECAQ9UBI9 543 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 PCDHA12Q9UN75 941 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 COL4A3BPQ9Y5P4 624 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 A0A087WWV3 80 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 UBE2QL1A1L167 161 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 DAPK3O43293 454 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 TGM5O43548 720 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 TSPAN1O60635 241 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 USO1O60763 962 aaKnown RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 FZD7O75084 574 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 TBX10O75333 385 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 IL9P15248 144 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 LAG3P18627 525 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 KCNA5P22460 613 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 ACRV1P26436 265 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 HOXA11P31270 313 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 ARL2P36404 184 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 PBX3P40426 434 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 MCM2P49736 904 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 PTENP60484 403 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 UBE3AQ05086 875 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 MBTD1Q05BQ5 628 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 FOXE3Q13461 319 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 CAPSQ13938 189 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 IL17AQ16552 155 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 AAK1Q2M2I8 961 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 OTUD6AQ7L8S5 288 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 CATSPER4Q7RTX7 472 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 BMP8AQ7Z5Y6 402 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 TMEM173Q86WV6 379 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 CATSPER3Q86XQ3 398 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 ZZZ3Q8IYH5 903 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 SLC39A11Q8N1S5 342 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 PPM1KQ8N3J5 372 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 RNF149Q8NC42 400 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 PLA2G15Q8NCC3 412 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 OR2W6PQ8NHA6 318 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 IL17DQ8TAD2 202 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 PIGOQ8TEQ8 1089 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 TCP11Q8WWU5 503 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 PRPF31Q8WWY3 499 aaKnown RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 LPPQ93052 612 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 PLEKHG4BQ96PX9 1271 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 POLR3CQ9BUI4 534 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 INO80BQ9C086 356 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 POLR3FQ9H1D9 316 aaPredicted RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 DACT1Q9NYF0 836 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 USP18Q9UMW8 372 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 NOL7Q9UMY1 257 aaKnown RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 PIN4Q9Y237 131 aaKnown RBP4.58□□□□□ -1.68
VTI1B-203ENST00000554636 PCDHB6Q9Y5E3 794 aa4.58□□□□□ -1.68
VTI1B-203ENST00000554636 H3BQ06 376 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 INPPL1O15357 1258 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 LINC01565O15544 149 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 ASAP2O43150 1006 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 OFD1O75665 1012 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 FGF18O76093 207 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 GLP2RO95838 553 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 EDN1P05305 212 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 XRCC6P12956 609 aaKnown RBP eCLIP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 CYP11B2P19099 503 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 POU3F2P20265 443 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 MUTP22033 750 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 RPA1P27694 616 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 GJB2P29033 226 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 TECP42680 631 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 RAB27AP51159 221 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 ADAM8P78325 824 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 POU5F1BQ06416 359 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 KLF10Q13118 480 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 CUL4AQ13619 759 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 MXD4Q14582 209 aaPredicted RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 ELAVL1Q15717 326 aaKnown RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 DUSP6Q16828 381 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 NOMO2Q5JPE7 1267 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 ZBTB41Q5SVQ8 909 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 SPOUT1Q5T280 376 aaKnown RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 HAUS3Q68CZ6 603 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 IGFL4Q6B9Z1 124 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 TWF2Q6IBS0 349 aaKnown RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 KANSL1Q7Z3B3 1105 aa4.57□□□□□ -1.68
VTI1B-203ENST00000554636 MRPL10Q7Z7H8 261 aaKnown RBP4.57□□□□□ -1.68
VTI1B-203ENST00000554636 ADGRE4PQ86SQ3 457 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms