RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 SEMA4DQ92854 862 aa25.27■■□□□ 1.64
FOXA1-204ENST00000554607 LRRC4Q9HBW1 653 aa25.27■■□□□ 1.64
FOXA1-204ENST00000554607 STOML2Q9UJZ1 356 aa25.27■■□□□ 1.64
FOXA1-204ENST00000554607 MAPK8IP1Q9UQF2 711 aa25.27■■□□□ 1.64
FOXA1-204ENST00000554607 HPSEQ9Y251 543 aa25.27■■□□□ 1.64
FOXA1-204ENST00000554607 ANKRD6Q9Y2G4 727 aa25.27■■□□□ 1.64
FOXA1-204ENST00000554607 SNX11Q9Y5W9 270 aa25.27■■□□□ 1.64
FOXA1-204ENST00000554607 CABIN1Q9Y6J0 2220 aa25.27■■□□□ 1.64
FOXA1-204ENST00000554607 KNL1Q8NG31 2342 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 XPO1O14980 1071 aaKnown RBP25.26■■□□□ 1.63
FOXA1-204ENST00000554607 TNFSF14O43557 240 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 TSPAN3O60637 253 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 SEMA4FO95754 770 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 DNTTP04053 509 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 ATP5BP06576 529 aaKnown RBP25.26■■□□□ 1.63
FOXA1-204ENST00000554607 MXI1P50539 228 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 ADGRF1Q5T601 910 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 AHI1Q8N157 1196 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.26■■□□□ 1.63
FOXA1-204ENST00000554607 CYB5D2Q8WUJ1 264 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 GOLGA1Q92805 767 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 IGSF8Q969P0 613 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 IPO9Q96P70 1041 aaKnown RBP25.26■■□□□ 1.63
FOXA1-204ENST00000554607 TM9SF3Q9HD45 589 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 SCUBE2Q9NQ36 999 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 SUN2Q9UH99 717 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 RAXQ9Y2V3 346 aa25.26■■□□□ 1.63
FOXA1-204ENST00000554607 GRK6P43250 576 aa25.25■■□□□ 1.63
FOXA1-204ENST00000554607 SYKP43405 635 aa25.25■■□□□ 1.63
FOXA1-204ENST00000554607 BCAT1P54687 386 aa25.25■■□□□ 1.63
FOXA1-204ENST00000554607 TTC31Q49AM3 519 aaPredicted RBP25.25■■□□□ 1.63
FOXA1-204ENST00000554607 KIAA0907Q7Z7F0 614 aaPredicted RBP25.25■■□□□ 1.63
FOXA1-204ENST00000554607 HNRNPLLQ8WVV9 542 aaKnown RBP25.25■■□□□ 1.63
FOXA1-204ENST00000554607 IRX2Q9BZI1 471 aaPredicted RBP25.25■■□□□ 1.63
FOXA1-204ENST00000554607 SGK2Q9HBY8 427 aa25.25■■□□□ 1.63
FOXA1-204ENST00000554607 ABCB8Q9NUT2 735 aa25.25■■□□□ 1.63
FOXA1-204ENST00000554607 HESX1Q9UBX0 185 aa25.25■■□□□ 1.63
FOXA1-204ENST00000554607 GGA2Q9UJY4 613 aa25.25■■□□□ 1.63
FOXA1-204ENST00000554607 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.25■■□□□ 1.63
FOXA1-204ENST00000554607 GOLGA8CPA6NN73 597 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 PCDHGA12O60330 932 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 DLDP09622 509 aaKnown RBP25.24■■□□□ 1.63
FOXA1-204ENST00000554607 PABPC1P11940 636 aaKnown RBP25.24■■□□□ 1.63
FOXA1-204ENST00000554607 CD27P26842 260 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 CCT8P50990 548 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 RPS14P62263 151 aaKnown RBP25.24■■□□□ 1.63
FOXA1-204ENST00000554607 GOLGA7BQ2TAP0 167 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 EDRF1Q3B7T1 1238 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 SOWAHCQ53LP3 525 aaPredicted RBP25.24■■□□□ 1.63
FOXA1-204ENST00000554607 BSPRYQ5W0U4 402 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 BHLHA9Q7RTU4 235 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 ADIPOR2Q86V24 386 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 HSCBQ8IWL3 235 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 ZNF557Q8N988 423 aaPredicted RBP25.24■■□□□ 1.63
FOXA1-204ENST00000554607 NDRG1Q92597 394 aaKnown RBP25.24■■□□□ 1.63
FOXA1-204ENST00000554607 BIRC7Q96CA5 298 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 PRSS16Q9NQE7 514 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 ABCC13Q9NSE7 274 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 SFMBT1Q9UHJ3 866 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 BTBD3Q9Y2F9 522 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 APC2O95996 2303 aa25.24■■□□□ 1.63
FOXA1-204ENST00000554607 DFNA5O60443 496 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 FSBPO95073 299 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 BST2Q10589 180 aaKnown RBP25.23■■□□□ 1.63
FOXA1-204ENST00000554607 DPYDQ12882 1025 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 NUMA1Q14980 2115 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 PTPRNQ16849 979 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 INAVAQ3KP66 663 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 SGO2Q562F6 1265 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 MBLAC2Q68D91 279 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 ZNF366Q8N895 744 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 TATDN2Q93075 761 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 TSPAN16Q9UKR8 245 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 NCKAP1Q9Y2A7 1128 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 SLCO1B1Q9Y6L6 691 aa25.23■■□□□ 1.63
FOXA1-204ENST00000554607 TRABD2BA6NFA1 517 aa25.22■■□□□ 1.63
FOXA1-204ENST00000554607 PRR29P0C7W0 189 aa25.22■■□□□ 1.63
FOXA1-204ENST00000554607 EPB41P11171 864 aaKnown RBP25.22■■□□□ 1.63
FOXA1-204ENST00000554607 POLR2EP19388 210 aaKnown RBP25.22■■□□□ 1.63
FOXA1-204ENST00000554607 YWHAEP62258 255 aaKnown RBP25.22■■□□□ 1.63
FOXA1-204ENST00000554607 ZCWPW2Q504Y3 356 aa25.22■■□□□ 1.63
FOXA1-204ENST00000554607 MPP7Q5T2T1 576 aa25.22■■□□□ 1.63
FOXA1-204ENST00000554607 ADAT2Q7Z6V5 191 aaKnown RBP25.22■■□□□ 1.63
FOXA1-204ENST00000554607 SIX6OS1Q8N1H7 587 aa25.22■■□□□ 1.63
FOXA1-204ENST00000554607 EDEM1Q92611 657 aa25.22■■□□□ 1.63
FOXA1-204ENST00000554607 SCML1Q9UN30 329 aa25.22■■□□□ 1.63
FOXA1-204ENST00000554607 TULP2O00295 520 aa25.21■■□□□ 1.63
FOXA1-204ENST00000554607 CETN3O15182 167 aa25.21■■□□□ 1.63
FOXA1-204ENST00000554607 ADIGQ0VDE8 80 aa25.21■■□□□ 1.63
FOXA1-204ENST00000554607 SFSWAPQ12872 951 aaKnown RBP25.21■■□□□ 1.63
FOXA1-204ENST00000554607 PKP1Q13835 747 aa25.21■■□□□ 1.63
FOXA1-204ENST00000554607 ZNF776Q68DI1 518 aaPredicted RBP25.21■■□□□ 1.63
FOXA1-204ENST00000554607 SCML4Q8N228 414 aa25.21■■□□□ 1.63
FOXA1-204ENST00000554607 PDCD7Q8N8D1 485 aaKnown RBP25.21■■□□□ 1.63
FOXA1-204ENST00000554607 KCTD13Q8WZ19 329 aa25.21■■□□□ 1.63
FOXA1-204ENST00000554607 SPATA32Q96LK8 384 aa25.21■■□□□ 1.63
FOXA1-204ENST00000554607 CNGB3Q9NQW8 809 aa25.21■■□□□ 1.63
FOXA1-204ENST00000554607 KIAA1257Q9ULG3 409 aa25.21■■□□□ 1.63
FOXA1-204ENST00000554607 URB1O60287 2271 aaKnown RBP25.21■■□□□ 1.63
FOXA1-204ENST00000554607 GOLGA4Q13439 2230 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms