RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 MKRN2Q9H000 416 aaKnown RBP6.89□□□□□ -1.31
SLIRP-203ENST00000554074 TMEM245Q9H330 911 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 SLC32A1Q9H598 525 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 DNAAF2Q9NVR5 837 aaKnown RBP6.89□□□□□ -1.31
SLIRP-203ENST00000554074 WSB2Q9NYS7 404 aaPredicted RBP6.89□□□□□ -1.31
SLIRP-203ENST00000554074 SFMBT1Q9UHJ3 866 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 CLEC4EQ9ULY5 219 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 CYP8B1Q9UNU6 501 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 WASF3Q9UPY6 502 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 PCDHB4Q9Y5E5 795 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 RAD54BQ9Y620 910 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 PLXNB3Q9ULL4 1909 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 GOLGA4Q13439 2230 aaKnown RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 CHD5Q8TDI0 1954 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 ATXN2Q99700 1313 aaKnown RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 METTL12A8MUP2 240 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 M0QYV0 167 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 RNF225M0QZC1 329 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 ARHGAP33O14559 1287 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 GIPC1O14908 333 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 OPHN1O60890 802 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 GJB3O75712 270 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 FGFR1OPO95684 399 aaKnown RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 AFPP02771 609 aaKnown RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 LTFP02788 710 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 CFIP05156 583 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 PABPC1P11940 636 aaKnown RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 LCP1P13796 627 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 PRKCHP24723 683 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 HLA-FP30511 346 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 ACADSBP45954 432 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 MAPK8P45983 427 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 SLC11A2P49281 568 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 TPMTP51580 245 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 COPAP53621 1224 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 ATXN3P54252 364 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 ZBTB16Q05516 673 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 KCNH2Q12809 1159 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 LRMPQ12912 555 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 PAK1Q13153 545 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 UAP1L1Q3KQV9 507 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 PIK3R6Q5UE93 754 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 TMEM215Q68D42 235 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 KLHL10Q6JEL2 608 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 KIAA1324Q6UXG2 1013 aaKnown RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 SERPINA13PQ6UXR4 307 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 ENOSF1Q7L5Y1 443 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 ADIPOR2Q86V24 386 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 TMPRSS6Q8IU80 811 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 HDDC3Q8N4P3 179 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 EHBP1Q8NDI1 1231 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 OR2T3Q8NH03 318 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 EDEM1Q92611 657 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 PRCCQ92733 491 aaPredicted RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 GOLGA1Q92805 767 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 KAT5Q92993 513 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 SIPA1Q96FS4 1042 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 SERPINB11Q96P15 392 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 DDX50Q9BQ39 737 aaKnown RBP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 NUP58Q9BVL2 599 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 CIPCQ9C0C6 399 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 GGA2Q9UJY4 613 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 PLA2G4CQ9UP65 541 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 CTNND2Q9UQB3 1225 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 TLR6Q9Y2C9 796 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.88□□□□□ -1.31
SLIRP-203ENST00000554074 IGF2RP11717 2491 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 FAM208BQ5VWN6 2430 aa6.88□□□□□ -1.31
SLIRP-203ENST00000554074 AKAP13Q12802 2813 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ARID1BQ8NFD5 2236 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 A0A1B0GTW7 788 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 TYW5A2RUC4 315 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 GTPBP10A4D1E9 387 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 TMEM8BA6NDV4 472 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 KCNJ18B7U540 433 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 MSI1O43347 362 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 MED7O43513 233 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ACSL4O60488 711 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 MBD3O95983 291 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 FYNP06241 537 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ATP5BP06576 529 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 EPHX1P07099 455 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 PROS1P07225 676 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 DLDP09622 509 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ZNF883P0CG24 379 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 PRKCSHP14314 528 aaPredicted RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 BRD2P25440 801 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 GPD2P43304 727 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 RGS7P49802 495 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 TBX4P57082 545 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ARID5AQ03989 594 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ARID5BQ14865 1188 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 PTPRNQ16849 979 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 PLEKHG6Q3KR16 790 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 FAM133BQ5BKY9 247 aaKnown RBP6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ISM2Q6H9L7 571 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 TRIM65Q6PJ69 517 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 CHST9Q7L1S5 443 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 RRAGAQ7L523 313 aa6.87□□□□□ -1.31
SLIRP-203ENST00000554074 ARHGEF19Q8IW93 802 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms