RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 CPOXP36551 454 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 USP46P62068 366 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 TBL3Q12788 808 aaKnown RBP12.73□□□□□ -0.37
HDAC7-230ENST00000552960 CCNIQ14094 377 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 ZNF792Q3KQV3 632 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 GPR142Q7Z601 462 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 SESTD1Q86VW0 696 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 ADGRF2Q8IZF7 708 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 NPLOC4Q8TAT6 608 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 AFG1LQ8WV93 481 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 CNBD2Q96M20 576 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 POPDC2Q9HBU9 364 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 COMMD3-BMI1R4GMX3 469 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 LOXHD1Q8IVV2 1947 aa12.73□□□□□ -0.37
HDAC7-230ENST00000552960 GOLGA8QA0A0J9YX86 632 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 GOLGA8OA6NCC3 632 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 GOLGA8NF8WBI6 632 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 B4GALT5O43286 388 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 DGKIO75912 1065 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 GTF2A2P52657 109 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 NOMO1Q15155 1222 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 CES3Q6UWW8 571 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 RBM44Q6ZP01 1051 aaKnown RBP12.72□□□□□ -0.37
HDAC7-230ENST00000552960 PHTF2Q8N3S3 785 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 GALNT4Q8N4A0 578 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 C2orf69Q8N8R5 385 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 HEXIM2Q96MH2 286 aaKnown RBP12.72□□□□□ -0.37
HDAC7-230ENST00000552960 NLRP4Q96MN2 994 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 NIFKQ9BYG3 293 aaKnown RBP12.72□□□□□ -0.37
HDAC7-230ENST00000552960 ZNF518BQ9C0D4 1074 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 GRIP2Q9C0E4 1043 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 MINDY3Q9H8M7 445 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 GPAMQ9HCL2 828 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 HMGXB4Q9UGU5 601 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 CNTN6Q9UQ52 1028 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 POMPQ9Y244 141 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 SCN4AP35499 1836 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 ARID2Q68CP9 1835 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 SLC15A5A6NIM6 579 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 NEMP1O14524 444 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 TGFB3P10600 412 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 TFDP2Q14188 446 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 CNGA3Q16281 694 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 PPM1JQ5JR12 505 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 PDPK2PQ6A1A2 396 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 PAOXQ6QHF9 649 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 XYLT1Q86Y38 959 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 RNF149Q8NC42 400 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 RXFP2Q8WXD0 754 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 PIWIL1Q96J94 861 aaKnown RBP12.72□□□□□ -0.37
HDAC7-230ENST00000552960 CEP41Q9BYV8 373 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 ZNF358Q9NW07 568 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 ASNSD1Q9NWL6 643 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 DOCK3Q8IZD9 2030 aa12.72□□□□□ -0.37
HDAC7-230ENST00000552960 C15orf38-AP3S2A0A0A6YYH1 394 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 CHADO15335 359 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 PMLP29590 882 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 SERPINB5P36952 375 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 ARHGAP1Q07960 439 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 WASHC5Q12768 1159 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 ITGA9Q13797 1035 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 FRMD7Q6ZUT3 714 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 ARPINQ7Z6K5 226 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 DPP9Q86TI2 863 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 C10orf107Q8IVU9 208 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 AZIN2Q96A70 460 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 MOCOSQ96EN8 888 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 ZNF778Q96MU6 729 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 EFR3BQ9Y2G0 817 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 DTNAQ9Y4J8 743 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 LRRC37A2A6NM11 1700 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 KLHL2O95198 593 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 CHN2P52757 468 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 LSAMPQ13449 338 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 FBXL19Q6PCT2 694 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 TNS4Q8IZW8 715 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 KLHL23Q8NBE8 558 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-230ENST00000552960 CEP70Q8NHQ1 597 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 PGLYRP2Q96PD5 576 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 TWNKQ96RR1 684 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 RNF19AQ9NV58 838 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 TXNDC16Q9P2K2 825 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 PCDHGB4Q9UN71 923 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 PCDHGB5Q9Y5G0 923 aa12.71□□□□□ -0.37
HDAC7-230ENST00000552960 HMX2A2RU54 273 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 TPP1O14773 563 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 METTL18O95568 372 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 CLPTM1O96005 669 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 TCN1P20061 433 aaPredicted RBP12.71□□□□□ -0.38
HDAC7-230ENST00000552960 NAMPTP43490 491 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 ABCG1P45844 678 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 LAMTOR4Q0VGL1 99 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 BRSK2Q8IWQ3 736 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 HACE1Q8IYU2 909 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 PLD5Q8N7P1 536 aa12.71□□□□□ -0.38
HDAC7-230ENST00000552960 ATP2A3Q93084 1043 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms