RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 DSEQ9UL01 958 aa8.8□□□□□ -1
PRIM1-208ENST00000552590 NAP1L2Q9ULW6 460 aaPredicted RBP8.8□□□□□ -1
PRIM1-208ENST00000552590 A0A1W2PPC4 97 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 A0A1W2PR77 199 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 FAM47DPA6NHR8 397 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 CACNG3O60359 315 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 VPS4BO75351 444 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 DDAH2O95865 285 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 CISD3P0C7P0 127 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 TYRP14679 529 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 MSX1P28360 303 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 CD38P28907 300 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 SLC5A2P31639 672 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 NXPH1P58417 271 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 TSPY1Q01534 308 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 NFE2Q16621 373 aaPredicted RBP8.79□□□□□ -1
PRIM1-208ENST00000552590 MANEAQ5SRI9 462 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 BORAQ6PGQ7 559 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 DDX42Q86XP3 938 aaKnown RBP eCLIP8.79□□□□□ -1
PRIM1-208ENST00000552590 ADGRF2Q8IZF7 708 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 MAPK15Q8TD08 544 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 WBP2Q969T9 261 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 IFT74Q96LB3 600 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 XPO6Q96QU8 1125 aaKnown RBP8.79□□□□□ -1
PRIM1-208ENST00000552590 PYM1Q9BRP8 204 aaKnown RBP8.79□□□□□ -1
PRIM1-208ENST00000552590 BBS2Q9BXC9 721 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 LHX5Q9H2C1 402 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 VPS4AQ9UN37 437 aa8.79□□□□□ -1
PRIM1-208ENST00000552590 KLF18A0A0U1RQI7 1052 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 TTC26A0AVF1 554 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
PRIM1-208ENST00000552590 OAS1P00973 400 aaKnown RBP8.78□□□□□ -1
PRIM1-208ENST00000552590 ITGA2BP08514 1039 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 CKMT1AP12532 417 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 RARGP13631 454 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 TGM2P21980 687 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 PRKCHP24723 683 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 ZNF132P52740 706 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 ENPP2Q13822 863 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 PDIA5Q14554 519 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 C9orf57Q5W0N0 161 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 KIAA0895LQ68EN5 471 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 TPGS1Q6ZTW0 290 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 RSRC2Q7L4I2 434 aaKnown RBP8.78□□□□□ -1
PRIM1-208ENST00000552590 SPATS2Q86XZ4 545 aaKnown RBP8.78□□□□□ -1
PRIM1-208ENST00000552590 JAMLQ86YT9 394 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 FAM114A1Q8IWE2 563 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 SLC25A45Q8N413 288 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 WDR36Q8NI36 951 aaKnown RBP8.78□□□□□ -1
PRIM1-208ENST00000552590 BHMTQ93088 406 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 ARRDC3Q96B67 414 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 P2RY11Q96G91 374 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 ESYT1Q9BSJ8 1104 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 ABCB6Q9NP58 842 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 THAP10Q9P2Z0 257 aaPredicted RBP8.78□□□□□ -1
PRIM1-208ENST00000552590 TUBD1Q9UJT1 453 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 ITGB1BP2Q9UKP3 347 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 PCDHA4Q9UN74 947 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 SH3BP1Q9Y3L3 701 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 JMJD1CQ15652 2540 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 UBE4BO95155 1302 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 PTPRJQ12913 1337 aa8.78□□□□□ -1
PRIM1-208ENST00000552590 LACTBL1A8MY62 500 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 M0R2N6 131 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 TLR4O00206 839 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 FFAR2O15552 330 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 CCNT1O60563 726 aaKnown RBP8.77□□□□□ -1
PRIM1-208ENST00000552590 EPHX1P07099 455 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 XRCC6P12956 609 aaKnown RBP eCLIP8.77□□□□□ -1
PRIM1-208ENST00000552590 CYP11B2P19099 503 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 ACAT1P24752 427 aaKnown RBP8.77□□□□□ -1
PRIM1-208ENST00000552590 SCTRP47872 440 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 CDH8P55286 799 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 MYL7Q01449 175 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 NAA30Q147X3 362 aaPredicted RBP8.77□□□□□ -1
PRIM1-208ENST00000552590 SPATA1Q5VX52 437 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 C9orf43Q8TAL5 461 aaPredicted RBP8.77□□□□□ -1
PRIM1-208ENST00000552590 LEO1Q8WVC0 666 aaPredicted RBP8.77□□□□□ -1
PRIM1-208ENST00000552590 ERVMER34-1Q9H9K5 563 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 PLEKHA5Q9HAU0 1116 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 CASS4Q9NQ75 786 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 SEL1LQ9UBV2 794 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 GTF3C4Q9UKN8 822 aa8.77□□□□□ -1
PRIM1-208ENST00000552590 DIDO1Q9BTC0 2240 aaKnown RBP8.77□□□□□ -1.01
PRIM1-208ENST00000552590 COL6A5A8TX70 2615 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 SHANK1Q9Y566 2161 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 CCDC169A6NNP5 214 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 PIRO00625 290 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 XPOTO43592 962 aaKnown RBP8.77□□□□□ -1.01
PRIM1-208ENST00000552590 GP1BAP07359 652 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 IRF1P10914 325 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 ACO1P21399 889 aaKnown RBP8.77□□□□□ -1.01
PRIM1-208ENST00000552590 AKAP17AQ02040 695 aaKnown RBP8.77□□□□□ -1.01
PRIM1-208ENST00000552590 ZNF234Q14588 700 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 NOLC1Q14978 699 aaKnown RBP eCLIP8.77□□□□□ -1.01
PRIM1-208ENST00000552590 HS1BP3Q53T59 392 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 HEATR4Q86WZ0 1026 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 BLIDQ8IZY5 108 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 OXR1Q8N573 874 aa8.77□□□□□ -1.01
PRIM1-208ENST00000552590 OR2T3Q8NH03 318 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms