RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 LOC400499M0QZD8 3231 aa17.65■□□□□ 0.42
CACNB3-222ENST00000552465 VILLO15195 856 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 ATXN7O15265 892 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-222ENST00000552465 C1QL1O75973 258 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 IGHV4-34P06331 123 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 EIF2S3P41091 472 aaKnown RBP17.64■□□□□ 0.41
CACNB3-222ENST00000552465 GCLMP48507 274 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 HARS2P49590 506 aaKnown RBP17.64■□□□□ 0.41
CACNB3-222ENST00000552465 C21orf59P57076 290 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 RACK1P63244 317 aaKnown RBP17.64■□□□□ 0.41
CACNB3-222ENST00000552465 TTC31Q49AM3 519 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-222ENST00000552465 ZNF394Q53GI3 561 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 PRAMEF14Q5SWL7 426 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 KIAA0895LQ68EN5 471 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 GATAD2AQ86YP4 633 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.64■□□□□ 0.41
CACNB3-222ENST00000552465 GOLGA1Q92805 767 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 TMA16Q96EY4 203 aaKnown RBP17.64■□□□□ 0.41
CACNB3-222ENST00000552465 ACE2Q9BYF1 805 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-222ENST00000552465 ABCB8Q9NUT2 735 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 SUN2Q9UH99 717 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 STOML2Q9UJZ1 356 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 GOLGA4Q13439 2230 aaKnown RBP17.64■□□□□ 0.41
CACNB3-222ENST00000552465 CABIN1Q9Y6J0 2220 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 MYH10P35580 1976 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 KNL1Q8NG31 2342 aa17.64■□□□□ 0.41
CACNB3-222ENST00000552465 CELSR3Q9NYQ7 3312 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 ENC1O14682 589 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 MAPK13O15264 365 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 DLDP09622 509 aaKnown RBP17.63■□□□□ 0.41
CACNB3-222ENST00000552465 C1SP09871 688 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 CDK4P11802 303 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 PABPC1P11940 636 aaKnown RBP17.63■□□□□ 0.41
CACNB3-222ENST00000552465 TKTL1P51854 596 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 CLDN6P56747 220 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 ZNF445P59923 1031 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 PPP3CAQ08209 521 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 C6orf118Q5T5N4 469 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 MBLAC2Q68D91 279 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 ZNF776Q68DI1 518 aaPredicted RBP17.63■□□□□ 0.41
CACNB3-222ENST00000552465 PM20D1Q6GTS8 502 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 FMNL3Q8IVF7 1028 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 ZC3H3Q8IXZ2 948 aaKnown RBP17.63■□□□□ 0.41
CACNB3-222ENST00000552465 AHI1Q8N157 1196 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 EXOC1Q9NV70 894 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 FAM13BQ9NYF5 915 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 GGA2Q9UJY4 613 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 RAI2Q9Y5P3 530 aa17.63■□□□□ 0.41
CACNB3-222ENST00000552465 SMG1Q96Q15 3661 aaKnown RBP17.63■□□□□ 0.41
CACNB3-222ENST00000552465 NUMA1Q14980 2115 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 A0A1W2PPC4 97 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 TLX3O43711 291 aaPredicted RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 LDOC1O95751 146 aaPredicted RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 ZBED1O96006 694 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 ATP5BP06576 529 aaKnown RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 PDIA4P13667 645 aaKnown RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 HNF1BP35680 557 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 SEMG2Q02383 582 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 SHBQ15464 509 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 KMT5BQ4FZB7 885 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 ADGRF1Q5T601 910 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 LRRC69Q6ZNQ3 347 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 USP30Q70CQ3 517 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 CCDC150Q8NCX0 1101 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 LSM14AQ8ND56 463 aaKnown RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 NDRG1Q92597 394 aaKnown RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 CNDP2Q96KP4 475 aaKnown RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 SLC6A18Q96N87 628 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 ELF4Q99607 663 aaPredicted RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 OLA1Q9NTK5 396 aaKnown RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 NCKAP1Q9Y2A7 1128 aa17.62■□□□□ 0.41
CACNB3-222ENST00000552465 HBS1LQ9Y450 684 aaKnown RBP17.62■□□□□ 0.41
CACNB3-222ENST00000552465 CBX4O00257 560 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 RFPL3O75679 317 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 WNT1P04628 370 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 TRIM49P0CI25 452 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 TRIM49CP0CI26 452 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 GALCP54803 685 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 TARDBPQ13148 414 aaKnown RBP eCLIP17.61■□□□□ 0.41
CACNB3-222ENST00000552465 DNAJC3Q13217 504 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 RESP18Q5W5W9 173 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 ARHGAP17Q68EM7 881 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 BHLHA9Q7RTU4 235 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 CEP57L1Q8IYX8 460 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 ANKRD52Q8NB46 1076 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 SLC4A11Q8NBS3 891 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 SAP25Q8TEE9 199 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 GANCQ8TET4 914 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 SKA1Q96BD8 255 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 PAGE5Q96GU1 130 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 TMEM176AQ96HP8 235 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 ULBP1Q9BZM6 244 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 RSPH9Q9H1X1 276 aaPredicted RBP17.61■□□□□ 0.41
CACNB3-222ENST00000552465 PABPC3Q9H361 631 aaKnown RBP17.61■□□□□ 0.41
CACNB3-222ENST00000552465 MTG2Q9H4K7 406 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 EBF2Q9HAK2 575 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 SFMBT1Q9UHJ3 866 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 SERTAD1Q9UHV2 236 aa17.61■□□□□ 0.41
CACNB3-222ENST00000552465 SCML1Q9UN30 329 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms