RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 ADRA1BP35368 520 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 HDAC4P56524 1084 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 CCDC38Q502W7 563 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 CEP85LQ5SZL2 805 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 PPP1R2P3Q6NXS1 205 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 ZBED8Q8IZ13 594 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 OR7D4Q8NG98 312 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 GRIN3AQ8TCU5 1115 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 SKA2Q8WVK7 121 aaPredicted RBP8.44□□□□□ -1.06
CHPT1-208ENST00000552215 NCAPGQ9BPX3 1015 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 SMYD2Q9NRG4 433 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 DDX56Q9NY93 547 aaKnown RBP8.44□□□□□ -1.06
CHPT1-208ENST00000552215 INTUQ9ULD6 942 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 HCFC2Q9Y5Z7 792 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 SQORQ9Y6N5 450 aa8.44□□□□□ -1.06
CHPT1-208ENST00000552215 TBC1D3BA6NDS4 549 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 LRIG2O94898 1065 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 RHOCP08134 193 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 COL6A1P12109 1028 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 DSC1Q08554 894 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 TSTA3Q13630 321 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 OLFML1Q6UWY5 402 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 VSTM1Q6UX27 236 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 JAMLQ86YT9 394 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 PEBP4Q96S96 227 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 SLC9A7Q96T83 725 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 GAS2L1Q99501 681 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ATP13A1Q9HD20 1204 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 AFF4Q9UHB7 1163 aaKnown RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 RSPH14Q9UHP6 348 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 PCDHGC3Q9UN70 934 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 PCDHA3Q9Y5H8 950 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ZNF646O15015 1829 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 KRT15P19012 456 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 RFC2P35250 354 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ABCG1P45844 678 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 RECQLP46063 649 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ATP1A2P50993 1020 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 PDIA2Q13087 525 aaKnown RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 SLC25A52Q3SY17 297 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 MFN1Q8IWA4 741 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 OR6P1Q8NGX9 317 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 SERPINB11Q96P15 392 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 RBM22Q9NW64 420 aaKnown RBP eCLIP8.43□□□□□ -1.061e-11■□□□□ 10.9
CHPT1-208ENST00000552215 FEZ2Q9UHY8 353 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 EP300Q09472 2414 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 PJA2O43164 708 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 IFNAR2P48551 515 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 FAM189BP81408 668 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 COG7P83436 770 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 KDSRQ06136 332 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 OLIG2Q13516 323 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ADGRD2Q7Z7M1 963 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 RPAINQ86UA6 219 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ANKRD42Q8N9B4 389 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 MAIP1Q8WWC4 291 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 KCTD15Q96SI1 283 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 EBF3Q9H4W6 596 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ELAC1Q9H777 363 aaKnown RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 AVENQ9NQS1 362 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 SAMD15Q9P1V8 674 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 CHMP2BQ9UQN3 213 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 YBX2Q9Y2T7 364 aaKnown RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ACTL7AQ9Y615 435 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 TRIP11Q15643 1979 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 CNTN5O94779 1100 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 CD72P21854 359 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 COILP38432 576 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 KPNA1P52294 538 aaPredicted RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ZNF132P52740 706 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 CSE1LP55060 971 aaKnown RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ARHGAP17Q68EM7 881 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 DPY19L2P1Q6NXN4 242 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 C14orf80Q86SX3 495 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 CMTM8Q8IZV2 173 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 TDRD5Q8NAT2 981 aaKnown RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 SH3RF2Q8TEC5 729 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 LRRC45Q96CN5 670 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 VCPIP1Q96JH7 1222 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 MYOCQ99972 504 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 KXD1Q9BQD3 176 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 UNKQ9C0B0 810 aaKnown RBP8.43□□□□□ -1.06
CHPT1-208ENST00000552215 ABCG8Q9H221 673 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 CWH43Q9H720 699 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 SHOC2Q9UQ13 582 aa8.43□□□□□ -1.06
CHPT1-208ENST00000552215 MYO18AQ92614 2054 aaKnown RBP8.42□□□□□ -1.06
CHPT1-208ENST00000552215 CDH23Q9H251 3354 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 TRAV19A0A0A6YYK7 116 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 TBC1D4O60343 1298 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 TADA3O75528 432 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 F9P00740 461 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 RHOP08100 348 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 CLCN6P51797 869 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 ANKRD20A8PQ5CZ79 823 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 ATAT1Q5SQI0 421 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 GRK7Q8WTQ7 553 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 FMO2Q99518 471 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 SLC4A5Q9BY07 1137 aa8.42□□□□□ -1.06
CHPT1-208ENST00000552215 CARD9Q9H257 536 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms