RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 AFF3P51826 1226 aaKnown RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 CYP27A1Q02318 531 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 SFSWAPQ12872 951 aaKnown RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 TARDBPQ13148 414 aaKnown RBP eCLIP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 GNL2Q13823 731 aaKnown RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 LY6DQ14210 128 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 DHX8Q14562 1220 aaKnown RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 STARD3Q14849 445 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 SOWAHAQ2M3V2 549 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 FUT11Q495W5 492 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 HES3Q5TGS1 186 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 TDRD10Q5VZ19 366 aaKnown RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 CRELD2Q6UXH1 353 aaPredicted RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 C20orf204Q6ZNR8 217 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 USP49Q70CQ1 688 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 FAM124AQ86V42 546 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 GPBP1Q86WP2 473 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 FMNL3Q8IVF7 1028 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 SPACA3Q8IXA5 215 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 ZNF295-AS1Q8N0V1 137 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 CSGALNACT2Q8N6G5 542 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 TOP6BLQ8N6T0 577 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 ZSWIM2Q8NEG5 633 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 ENGASEQ8NFI3 743 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 CADM4Q8NFZ8 388 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 FGF11Q92914 225 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 KCNN1Q92952 543 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 FBXO32Q969P5 355 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 TMEM176AQ96HP8 235 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 C8orf76Q96K31 380 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 SLITRK1Q96PX8 696 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 BBS2Q9BXC9 721 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 MKRN2Q9H000 416 aaKnown RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 IKZF4Q9H2S9 585 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 FOXP1Q9H334 677 aaPredicted RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 ZHX3Q9H4I2 956 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 PARVGQ9HBI0 331 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 ITM2CQ9NQX7 267 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 GDAP2Q9NXN4 497 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 EHD2Q9NZN4 543 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 USP36Q9P275 1121 aaKnown RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 CDH9Q9ULB4 789 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 NOL7Q9UMY1 257 aaKnown RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 ANKRD6Q9Y2G4 727 aa5.69□□□□□ -1.5
HOXB3-213ENST00000552000 COL5A1P20908 1838 aaPredicted RBP5.69□□□□□ -1.5
HOXB3-213ENST00000552000 GFRA2O00451 464 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 ENC1O14682 589 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 GABRDO14764 452 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 COCHO43405 550 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 EPB41L2O43491 1005 aaKnown RBP5.68□□□□□ -1.5
HOXB3-213ENST00000552000 SLC28A2O43868 658 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 PCDHGA12O60330 932 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 CACNG3O60359 315 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 EIF5BO60841 1220 aaKnown RBP5.68□□□□□ -1.5
HOXB3-213ENST00000552000 RFPL3O75679 317 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 C6P13671 934 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 TYRP14679 529 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 YWHAQP27348 245 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 ADSSP30520 456 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 OXTRP30559 389 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 TXLNAP40222 546 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 IL12RB1P42701 662 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 TOB1P50616 345 aaPredicted RBP5.68□□□□□ -1.5
HOXB3-213ENST00000552000 CACNA2D1P54289 1103 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 NOP14P78316 857 aaKnown RBP5.68□□□□□ -1.5
HOXB3-213ENST00000552000 GTF2BQ00403 316 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 RHDQ02161 417 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 SRSF1Q07955 248 aaKnown RBP eCLIP5.68□□□□□ -1.52e-6■■□□□ 13
HOXB3-213ENST00000552000 ST3GAL1Q11201 340 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 DNAJC3Q13217 504 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 RTP5Q14D33 572 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 ANKRD1Q15327 319 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 TEAD4Q15561 434 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 MAPRE1Q15691 268 aaKnown RBP5.68□□□□□ -1.5
HOXB3-213ENST00000552000 INAVAQ3KP66 663 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 MDH1BQ5I0G3 518 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 KCNT1Q5JUK3 1230 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 PRAMEF14Q5SWL7 426 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 HYIQ5T013 277 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 HECTD3Q5T447 861 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 ARHGAP40Q5TG30 622 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 SLFN12LQ6IEE8 588 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 DTHD1Q6ZMT9 781 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 TPGS1Q6ZTW0 290 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 HS2ST1Q7LGA3 356 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 NT5DC4Q86YG4 428 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 GATAD2AQ86YP4 633 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 TMPRSS6Q8IU80 811 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 BRSK2Q8IWQ3 736 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 LRRC52Q8N7C0 313 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 CXorf38Q8TB03 319 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 CACTINQ8WUQ7 758 aaKnown RBP5.68□□□□□ -1.5
HOXB3-213ENST00000552000 KBTBD7Q8WVZ9 684 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 POMGNT1Q8WZA1 660 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 BHMTQ93088 406 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 IGSF8Q969P0 613 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 SAAL1Q96ER3 474 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 SIPA1Q96FS4 1042 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 PCED1BQ96HM7 432 aa5.68□□□□□ -1.5
HOXB3-213ENST00000552000 NAF1Q96HR8 494 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms