RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	TTC39C	Q8N584	583 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	FBXL13	Q8NEE6	735 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	SNX19	Q92543	992 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	EDEM1	Q92611	657 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	FAXDC2	Q96IV6	333 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	LHX5	Q9H2C1	402 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	TMEM245	Q9H330	911 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	CCDC86	Q9H6F5	360 aa	Known RBP	13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	RAB20	Q9NX57	234 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	SFMBT1	Q9UHJ3	866 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	TSPAN16	Q9UKR8	245 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	BTBD3	Q9Y2F9	522 aa		13.14	□□□□□ -0.31
LETMD1-231	ENST00000551931	COL5A1	P20908	1838 aa	Predicted RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	XPO1	O14980	1071 aa	Known RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	MSI1	O43347	362 aa	Known RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	TIMM44	O43615	452 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	DKK1	O94907	266 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	C7	P10643	843 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	ARID5A	Q03989	594 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	ADIG	Q0VDE8	80 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	E2F5	Q15329	346 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	PTPRN	Q16849	979 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	KIF19	Q2TAC6	998 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	FNDC3B	Q53EP0	1204 aa	Known RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	IL27RA	Q6UWB1	636 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	CHST9	Q7L1S5	443 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	ADIPOR2	Q86V24	386 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	WFDC5	Q8TCV5	224 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	CCDC47	Q96A33	483 aa	Known RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	SPATA32	Q96LK8	384 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	PCED1A	Q9H1Q7	454 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	ABCB8	Q9NUT2	735 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	STOML2	Q9UJZ1	356 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	HBS1L	Q9Y450	684 aa	Known RBP	13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	SNX11	Q9Y5W9	270 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	ASXL3	Q9C0F0	2248 aa		13.13	□□□□□ -0.31
LETMD1-231	ENST00000551931	YJEFN3	A6XGL0	299 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931		E7ENQ6	273 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	FLRT2	O43155	660 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	HARS2	P49590	506 aa	Known RBP	13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	AFF3	P51826	1226 aa	Known RBP	13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	BCAT1	P54687	386 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	SLC8A3	P57103	927 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	RPS14	P62263	151 aa	Known RBP	13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	COL28A1	Q2UY09	1125 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	EDRF1	Q3B7T1	1238 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	CBWD6	Q4V339	395 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	CBWD3	Q5JTY5	395 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	CBWD5	Q5RIA9	395 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	BSPRY	Q5W0U4	402 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	KRBA2	Q6ZNG9	492 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	TMPRSS7	Q7RTY8	843 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	RHBDD1	Q8TEB9	315 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	WFIKKN2	Q8TEU8	576 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	BIRC7	Q96CA5	298 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	GOLPH3L	Q9H4A5	285 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	LRRC4	Q9HBW1	653 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	TM9SF3	Q9HD45	589 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	PRSS16	Q9NQE7	514 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	OLA1	Q9NTK5	396 aa	Known RBP	13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	GGA2	Q9UJY4	613 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	RAX	Q9Y2V3	346 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	PCDHGB2	Q9Y5G2	931 aa		13.12	□□□□□ -0.31
LETMD1-231	ENST00000551931	KALRN	O60229	2985 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	HELZ2	Q9BYK8	2649 aa	Known RBP	13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	GOLGA8CP	A6NN73	597 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	KCNK3	O14649	394 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	SEMA4F	O95754	770 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	PABPC1	P11940	636 aa	Known RBP	13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	CD70	P32970	193 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	BST2	Q10589	180 aa	Known RBP	13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	CUL2	Q13617	745 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	SGO2	Q562F6	1265 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	KCNT1	Q5JUK3	1230 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	ADGRF1	Q5T601	910 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	MBLAC2	Q68D91	279 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	PDZD3	Q86UT5	571 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	AHI1	Q8N157	1196 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	UBA3	Q8TBC4	463 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	RNF139	Q8WU17	664 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	TMA16	Q96EY4	203 aa	Known RBP	13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	IPO9	Q96P70	1041 aa	Known RBP	13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	CDC6	Q99741	560 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	ORAI3	Q9BRQ5	295 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	MTG2	Q9H4K7	406 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	PLA2G4C	Q9UP65	541 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	ANKRD6	Q9Y2G4	727 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	ZDHHC9	Q9Y397	364 aa		13.11	□□□□□ -0.31
LETMD1-231	ENST00000551931	SETX	Q7Z333	2677 aa	Known RBP	13.1	□□□□□ -0.31
LETMD1-231	ENST00000551931	TDRD6	O60522	2096 aa	Known RBP	13.1	□□□□□ -0.31
LETMD1-231	ENST00000551931	GOLGA6L7	A0A1B0GV03	622 aa		13.1	□□□□□ -0.31
LETMD1-231	ENST00000551931		O00370	1275 aa		13.1	□□□□□ -0.31

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