RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 C2CD6Q53TS8 623 aa18■□□□□ 0.47
CDK4-208ENST00000551706 FSTL4Q6MZW2 842 aa18■□□□□ 0.47
CDK4-208ENST00000551706 TSSK4Q6SA08 328 aa18■□□□□ 0.47
CDK4-208ENST00000551706 NUDT18Q6ZVK8 323 aa18■□□□□ 0.47
CDK4-208ENST00000551706 ZNF571Q7Z3V5 609 aaPredicted RBP18■□□□□ 0.47
CDK4-208ENST00000551706 VPS36Q86VN1 386 aa18■□□□□ 0.47
CDK4-208ENST00000551706 ETFBKMTQ8IXQ9 262 aa18■□□□□ 0.47
CDK4-208ENST00000551706 VCPIP1Q96JH7 1222 aa18■□□□□ 0.47
CDK4-208ENST00000551706 FCRL2Q96LA5 508 aaPredicted RBP18■□□□□ 0.47
CDK4-208ENST00000551706 FAM126AQ9BYI3 521 aaPredicted RBP18■□□□□ 0.47
CDK4-208ENST00000551706 TRIM5Q9C035 493 aa18■□□□□ 0.47
CDK4-208ENST00000551706 RBSNQ9H1K0 784 aa18■□□□□ 0.47
CDK4-208ENST00000551706 DEC1Q9P2X7 70 aa18■□□□□ 0.47
CDK4-208ENST00000551706 SLC12A6Q9UHW9 1150 aa18■□□□□ 0.47
CDK4-208ENST00000551706 TMEM59LQ9UK28 342 aa18■□□□□ 0.47
CDK4-208ENST00000551706 RAB23Q9ULC3 237 aa18■□□□□ 0.47
CDK4-208ENST00000551706 PAXBP1Q9Y5B6 917 aa18■□□□□ 0.47
CDK4-208ENST00000551706 CACNG3O60359 315 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 ACSL4O60488 711 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 GZMAP12544 262 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 CASP14P31944 242 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 SLC25A52Q3SY17 297 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 MPPE1Q53F39 396 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 TDRD12Q587J7 1177 aaKnown RBP17.99■□□□□ 0.47
CDK4-208ENST00000551706 MAMSTRQ6ZN01 415 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 MON1BQ7L1V2 547 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 C3orf20Q8ND61 904 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 NT5C3BQ969T7 300 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 PGAP3Q96FM1 320 aaPredicted RBP17.99■□□□□ 0.47
CDK4-208ENST00000551706 NPY6RQ99463 290 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 FBRSL1Q9HCM7 1045 aaKnown RBP17.99■□□□□ 0.47
CDK4-208ENST00000551706 ARHGEF4Q9NR80 690 aa17.99■□□□□ 0.47
CDK4-208ENST00000551706 FAM170AA1A519 330 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 M0QYT0 321 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 TULP3O75386 442 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 F9P00740 461 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 EGFP01133 1207 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 PENKP01210 267 aaPredicted RBP17.98■□□□□ 0.47
CDK4-208ENST00000551706 APODP05090 189 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 SKILP12757 684 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 GRIA2P42262 883 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 PITX1P78337 314 aaPredicted RBP17.98■□□□□ 0.47
CDK4-208ENST00000551706 PPP2R5DQ14738 602 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 TSR1Q2NL82 804 aaKnown RBP17.98■□□□□ 0.47
CDK4-208ENST00000551706 ZC3H12AQ5D1E8 599 aaKnown RBP17.98■□□□□ 0.47
CDK4-208ENST00000551706 FYB2Q5VWT5 728 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 NAIF1Q69YI7 327 aaPredicted RBP17.98■□□□□ 0.47
CDK4-208ENST00000551706 SND1Q7KZF4 910 aaKnown RBP eCLIP17.98■□□□□ 0.47
CDK4-208ENST00000551706 C12orf40Q86WS4 652 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 NAT16Q8N8M0 369 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 ATP6V0D2Q8N8Y2 350 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 DDI1Q8WTU0 396 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 RNF34Q969K3 372 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 BTN2A3PQ96KV6 586 aa17.98■□□□□ 0.47
CDK4-208ENST00000551706 PRMT8Q9NR22 394 aaPredicted RBP17.98■□□□□ 0.47
CDK4-208ENST00000551706 METTL5Q9NRN9 209 aaKnown RBP17.98■□□□□ 0.47
CDK4-208ENST00000551706 RBM12Q9NTZ6 932 aaKnown RBP17.98■□□□□ 0.47
CDK4-208ENST00000551706 DNAJC17Q9NVM6 304 aaKnown RBP17.98■□□□□ 0.47
CDK4-208ENST00000551706 ANKRD11Q6UB99 2663 aaPredicted RBP17.97■□□□□ 0.47
CDK4-208ENST00000551706 A0A0A0MRY4 1105 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 TYW5A2RUC4 315 aaKnown RBP17.97■□□□□ 0.47
CDK4-208ENST00000551706 LRP3O75074 770 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 ATG13O75143 517 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 KAT7O95251 611 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 KRT3P12035 628 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 ABCB4P21439 1286 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 KCNA4P22459 653 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 HNRNPH3P31942 346 aaKnown RBP17.97■□□□□ 0.47
CDK4-208ENST00000551706 FLT3P36888 993 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 SLC6A11P48066 632 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 SULT1E1P49888 294 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 NME3Q13232 169 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 ACAP1Q15027 740 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 LPAL2Q16609 132 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 HGSNATQ68CP4 663 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 LAIR1Q6GTX8 287 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 GRAMD4Q6IC98 578 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 DNAJC24Q6P3W2 148 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 DRC7Q8IY82 874 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 MCOLN2Q8IZK6 566 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 SPEM1Q8N4L4 309 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 OR8K1Q8NGG5 319 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 OLIG1Q8TAK6 271 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 BHMTQ93088 406 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 TMA16Q96EY4 203 aaKnown RBP17.97■□□□□ 0.47
CDK4-208ENST00000551706 SELENOOQ9BVL4 669 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 SLC2A11Q9BYW1 496 aa17.97■□□□□ 0.47
CDK4-208ENST00000551706 SYNJ2BP-COX16A0A087WUM0 186 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 ANKRD62A6NC57 917 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 SIGLEC16A6NMB1 481 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 KCNU1A8MYU2 1149 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 GFRA2O00451 464 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 DDX3XO00571 662 aaKnown RBP eCLIP17.96■□□□□ 0.478e-17■■■■□ 25.6
CDK4-208ENST00000551706 RTN2O75298 545 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 MOCS2O96007 188 aaPredicted RBP17.96■□□□□ 0.47
CDK4-208ENST00000551706 SDC4P31431 198 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 TNFRSF4P43489 277 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 DGKGP49619 791 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 CCR3P51677 355 aa17.96■□□□□ 0.47
CDK4-208ENST00000551706 DEUP1Q05D60 604 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms