RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 DDX42Q86XP3 938 aaKnown RBP eCLIP14□□□□□ -0.17
ERBB3-215ENST00000550828 MFSD6LQ8IWD5 586 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 ADHFE1Q8IWW8 467 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 ZNF683Q8IZ20 524 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 PYROXD2Q8N2H3 581 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 NTAN1Q96AB6 310 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 PRICKLE1Q96MT3 831 aaPredicted RBP14□□□□□ -0.17
ERBB3-215ENST00000550828 PRMT1Q99873 361 aaKnown RBP14□□□□□ -0.17
ERBB3-215ENST00000550828 WDCPQ9H6R7 721 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 HPS4Q9NQG7 708 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14□□□□□ -0.17
ERBB3-215ENST00000550828 STOML2Q9UJZ1 356 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 FZD10Q9ULW2 581 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 USP18Q9UMW8 372 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 NEU3Q9UQ49 428 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 ZKSCAN5Q9Y2L8 839 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 NR2E1Q9Y466 385 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 HS3ST4Q9Y661 456 aa14□□□□□ -0.17
ERBB3-215ENST00000550828 NYNRINQ9P2P1 1898 aaKnown RBP13.99□□□□□ -0.17
ERBB3-215ENST00000550828 C19orf67A6NJJ6 358 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 FAM72CH0Y354 149 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 ARNTLO00327 626 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 TRDMT1O14717 391 aaKnown RBP13.99□□□□□ -0.17
ERBB3-215ENST00000550828 ACSL4O60488 711 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 RNF8O76064 485 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 FTCDO95954 541 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 APOEP02649 317 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 FCHO2Q0JRZ9 810 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 GAB4Q2WGN9 574 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 EML3Q32P44 896 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 ARHGAP29Q52LW3 1261 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 MS4A13Q5J8X5 152 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 FAM72AQ5TYM5 149 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 MANEALQ5VSG8 457 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 NUGGCQ68CJ6 796 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 FAM72DQ6L9T8 149 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 RFWD3Q6PCD5 774 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 MTSS1LQ765P7 747 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 NT5DC3Q86UY8 548 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 FAM72BQ86X60 149 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 TXLNBQ8N3L3 684 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 RNF10Q8N5U6 811 aaKnown RBP13.99□□□□□ -0.17
ERBB3-215ENST00000550828 KRT35Q92764 455 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 RNF34Q969K3 372 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 BTN2A3PQ96KV6 586 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 FAM83CQ9BQN1 747 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 ZWILCHQ9H900 591 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 KCNK12Q9HB15 430 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 KLHL11Q9NVR0 708 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 FAM50BQ9Y247 325 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 SH3BP1Q9Y3L3 701 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 SHROOM3Q8TF72 1996 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 TRIOO75962 3097 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 ATG2BQ96BY7 2078 aa13.99□□□□□ -0.17
ERBB3-215ENST00000550828 F5P12259 2224 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 OTOL1A6NHN0 477 aaPredicted RBP13.98□□□□□ -0.17
ERBB3-215ENST00000550828 FANCGO15287 622 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 ZSCAN12O43309 604 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 DCXO43602 365 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 LATS1O95835 1130 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 RARAP10276 462 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 DEKP35659 375 aaKnown RBP13.98□□□□□ -0.17
ERBB3-215ENST00000550828 GJC1P36383 396 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 HARS2P49590 506 aaKnown RBP13.98□□□□□ -0.17
ERBB3-215ENST00000550828 ARSEP51690 589 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 NAP1L1P55209 391 aaKnown RBP13.98□□□□□ -0.17
ERBB3-215ENST00000550828 TNK2Q07912 1038 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 SEMA3BQ13214 749 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 KCNT1Q5JUK3 1230 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 RAP1GAP2Q684P5 730 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 SND1Q7KZF4 910 aaKnown RBP eCLIP13.98□□□□□ -0.17
ERBB3-215ENST00000550828 ANKS1BQ7Z6G8 1248 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 DAAM2Q86T65 1068 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 UNC45BQ8IWX7 931 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 ATP6V0D2Q8N8Y2 350 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 OSCP1Q8WVF1 389 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 AZIN2Q96A70 460 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 KCTD15Q96SI1 283 aaPredicted RBP13.98□□□□□ -0.17
ERBB3-215ENST00000550828 DCLK3Q9C098 648 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 PRKAG3Q9UGI9 489 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 PACSIN2Q9UNF0 486 aaPredicted RBP13.98□□□□□ -0.17
ERBB3-215ENST00000550828 AP4E1Q9UPM8 1137 aa13.98□□□□□ -0.17
ERBB3-215ENST00000550828 MYO18AQ92614 2054 aaKnown RBP13.98□□□□□ -0.17
ERBB3-215ENST00000550828 DDX3YO15523 660 aaKnown RBP13.97□□□□□ -0.17
ERBB3-215ENST00000550828 NARSO43776 548 aaKnown RBP13.97□□□□□ -0.17
ERBB3-215ENST00000550828 SPOPO43791 374 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 PRPSAP2O60256 369 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 CYP17A1P05093 508 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 CD48P09326 243 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 SLC2A3P11169 496 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 TACR2P21452 398 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 SLC1A1P43005 524 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 AUHQ13825 339 aaKnown RBP13.97□□□□□ -0.17
ERBB3-215ENST00000550828 ADGRF1Q5T601 910 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 IER5LQ5T953 404 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 CIR1Q86X95 450 aaPredicted RBP13.97□□□□□ -0.17
ERBB3-215ENST00000550828 TMEM25Q86YD3 366 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 CPXM2Q8N436 756 aa13.97□□□□□ -0.17
ERBB3-215ENST00000550828 SLC44A3Q8N4M1 653 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms