RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	PIK3AP1	Q6ZUJ8	805 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	RFX8	Q6ZV50	586 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	TRAPPC11	Q7Z392	1133 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	FAM47B	Q8NA70	645 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	SRFBP1	Q8NEF9	429 aa	Known RBP	5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	IGFBPL1	Q8WX77	278 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	THOC3	Q96J01	351 aa	Known RBP	5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	CCDC136	Q96JN2	1154 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	RGL1	Q9NZL6	768 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	MSRB1	Q9NZV6	116 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	ANAPC4	Q9UJX5	808 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	ZNF580	Q9UK33	172 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	SLC8A2	Q9UPR5	921 aa		5.26	□□□□□ -1.57
CNOT2-222	ENST00000550155	TRBV5-3	A0A0A0MS03	114 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	TBXAS1	P24557	533 aa	Predicted RBP	5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	STAT6	P42226	847 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	CDKN2A	P42771	156 aa	Known RBP	5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	HLTF	Q14527	1009 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	CRELD2	Q6UXH1	353 aa	Predicted RBP	5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	RHPN2	Q8IUC4	686 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	LAS2	Q8IYD9	372 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	TMEM199	Q8N511	208 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	BRI3BP	Q8WY22	251 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	ZNF566	Q969W8	418 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	ELOVL1	Q9BW60	279 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	GATA5	Q9BWX5	397 aa	Predicted RBP	5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	MLXIP	Q9HAP2	919 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	TMEM8A	Q9HCN3	771 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	FZD3	Q9NPG1	666 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	HELLS	Q9NRZ9	838 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	ZBTB40	Q9NUA8	1239 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	CA14	Q9ULX7	337 aa		5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.25	□□□□□ -1.57
CNOT2-222	ENST00000550155	PNMA6E	A0A0J9YXQ4	647 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	ZNF814	B7Z6K7	855 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	NPC1	O15118	1278 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	PMM2	O15305	246 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	T-ENOL	P0DO92	83 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	HARS	P12081	509 aa	Known RBP	5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	TRIM27	P14373	513 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	CIITA	P33076	1130 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	THBS3	P49746	956 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	HTR6	P50406	440 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	DMWD	Q09019	674 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	INPP5J	Q15735	1006 aa	Predicted RBP	5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	KLHL22	Q53GT1	634 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	FAM209B	Q5JX69	171 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	ISM2	Q6H9L7	571 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	ARL14EP	Q8N8R7	260 aa	Predicted RBP	5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	GLIS1	Q8NBF1	620 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	ADAMTS15	Q8TE58	950 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	CENPI	Q92674	756 aa	Predicted RBP	5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	FAR2	Q96K12	515 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	C8orf48	Q96LL4	319 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	ABHD14A	Q9BUJ0	271 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	HIPK2	Q9H2X6	1198 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	THSD1	Q9NS62	852 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	PCDHB7	Q9Y5E2	793 aa		5.24	□□□□□ -1.57
CNOT2-222	ENST00000550155	KIR2DS5	A0A0G2JLQ3	304 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	TMEM272	A0A1B0GTI8	110 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	FAM234B	A2RU67	622 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	KIR2DS3	K7RE56	304 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	APAF1	O14727	1248 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	HNRNPDL	O14979	420 aa	Known RBP	5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	TNFSF4	P23510	183 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	PMS2P11	Q13670	270 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	PTGR1	Q14914	329 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	ADPRHL1	Q8NDY3	354 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	ACRBP	Q8NEB7	543 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	PJA1	Q8NG27	643 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	ZFPM2	Q8WW38	1151 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	GPR78	Q96P69	363 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	PIMREG	Q9BSJ6	248 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	CHPF2	Q9P2E5	772 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155	PCDHA12	Q9UN75	941 aa		5.23	□□□□□ -1.57
CNOT2-222	ENST00000550155		J3KTA2	159 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	PODXL	O00592	558 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	FGF18	O76093	207 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	EPN2	O95208	641 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	MYL3	P08590	195 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	EEF1G	P26641	437 aa	Known RBP	5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	KRTAP10-9	P60411	292 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	SMTNL2	Q2TAL5	461 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	ARL6IP4	Q66PJ3	421 aa	Known RBP	5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	WDR93	Q6P2C0	686 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	LRIG3	Q6UXM1	1119 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	NAA15	Q9BXJ9	866 aa	Known RBP	5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	NECTIN3	Q9NQS3	549 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	UTS2R	Q9UKP6	389 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	B3GNT3	Q9Y2A9	372 aa		5.22	□□□□□ -1.57
CNOT2-222	ENST00000550155	TTC3	P53804	2025 aa		5.21	□□□□□ -1.57
CNOT2-222	ENST00000550155	SMAD6	O43541	496 aa	Known RBP	5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	PARN	O95453	639 aa	Known RBP	5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	TNFRSF1B	P20333	461 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	PGGT1B	P53609	377 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	NANOS2	P60321	138 aa	Known RBP	5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	PPAT	Q06203	517 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	C6orf10	Q5SRN2	563 aa		5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms