RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 CKMT2P17540 419 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 CD38P28907 300 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 ARRB1P49407 418 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 EMP3P54852 163 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 TMPRSS3P57727 454 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 INSM1Q01101 510 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 BNIP3Q12983 259 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 ILKQ13418 452 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 NCOA4Q13772 614 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 TTC31Q49AM3 519 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 KDM7AQ6ZMT4 941 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 BRAPQ7Z569 592 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 NELFCDQ8IXH7 590 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 CPXM2Q8N436 756 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 ZNF276Q8N554 614 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 ZNF507Q8TCN5 953 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 GDF3Q9NR23 364 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 SRPRBQ9Y5M8 271 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-206ENST00000549358 A0A087X0B3 334 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 WNT9AO14904 365 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 SLC28A2O43868 658 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 KRT10P13645 584 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 P4HA1P13674 534 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 EPHA8P29322 1005 aaPredicted RBP11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 HLA-FP30511 346 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 KIF11P52732 1056 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 GALCP54803 685 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 PKDCCQ504Y2 493 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 MPPE1Q53F39 396 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 NCEH1Q6PIU2 408 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 CHST9Q7L1S5 443 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 EPM2AIP1Q7L775 607 aaPredicted RBP11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 CCDC186Q7Z3E2 898 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 ADIPOR2Q86V24 386 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 UNC93AQ86WB7 457 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 CACTIN-AS1Q8N1I8 211 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 DCBLD1Q8N8Z6 715 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 CDK5RAP1Q96SZ6 601 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 HNRNPABQ99729 332 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 MTG2Q9H4K7 406 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 FBRSQ9HAH7 460 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 FBXL12Q9NXK8 326 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 MGAQ8IWI9 3026 aa11.29□□□□□ -0.6
TRAFD1-206ENST00000549358 SLC12A8A0AV02 714 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 TLR4O00206 839 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 EIF3DO15371 548 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 YKT6O15498 198 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 STX6O43752 255 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 EXOC3O60645 756 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 VNN1O95497 513 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 MT-CO3P00414 261 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 C4BPAP04003 597 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 MPOP05164 745 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 HOXD9P28356 352 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 UCNP55089 124 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 PCBP4P57723 403 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 CEBPZQ03701 1054 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 SGSM1Q2NKQ1 1148 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 ZNF776Q68DI1 518 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 USP30Q70CQ3 517 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 RSRC2Q7L4I2 434 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 LURAP1LQ8IV03 231 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 DHX40Q8IX18 779 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 ZC3H3Q8IXZ2 948 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 PDILTQ8N807 584 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 RFFLQ8WZ73 363 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 HIC2Q96JB3 615 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 TMX3Q96JJ7 454 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 ZNF578Q96N58 590 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 TWNKQ96RR1 684 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 RSPH9Q9H1X1 276 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 NEUROG2Q9H2A3 272 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 PABPC3Q9H361 631 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 PNPLA8Q9NP80 782 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 ABCB8Q9NUT2 735 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 MARCH2Q9P0N8 246 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 SERGEFQ9UGK8 458 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 SUN2Q9UH99 717 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 ADAMTS1Q9UHI8 967 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 STRIP2Q9ULQ0 834 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 SMC3Q9UQE7 1217 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 PCDHB1Q9Y5F3 818 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 USP3Q9Y6I4 520 aa11.28□□□□□ -0.6
TRAFD1-206ENST00000549358 A0A1W2PP55 124 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 A0A1W2PR77 199 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 LRRIQ3A6PVS8 624 aaPredicted RBP11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 KLK10O43240 276 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 RNASEH2AO75792 299 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 ATP5BP06576 529 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 DLDP09622 509 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 TRIM21P19474 475 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 ACP1P24666 158 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 AP3M2P53677 418 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 NXPH1P58417 271 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 SNRPFP62306 86 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms