RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CYP4F22Q6NT55 531 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 SLC26A11Q86WA9 606 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 TREML1Q86YW5 311 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 GRAMD1CQ8IYS0 662 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 ALDH16A1Q8IZ83 802 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 KIRREL3Q8IZU9 778 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 CARFQ8N187 725 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 OXR1Q8N573 874 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 OR5B17Q8NGF7 314 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 WFIKKN2Q8TEU8 576 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 SMCR8Q8TEV9 937 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 ELSPBP1Q96BH3 223 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 METTL2AQ96IZ6 378 aaKnown RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 LENG8Q96PV6 779 aaPredicted RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 SLITRK1Q96PX8 696 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 AGO3Q9H9G7 860 aaKnown RBP5.09□□□□□ -1.59
SCAF11-212ENST00000549162 PCDH9Q9HC56 1237 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 ABCC13Q9NSE7 274 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 KLF15Q9UIH9 416 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 L1RE1Q9UN81 338 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 HCN4Q9Y3Q4 1203 aa5.09□□□□□ -1.59
SCAF11-212ENST00000549162 RECQL4O94761 1208 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 NFICP08651 508 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 ALOX15P16050 662 aaPredicted RBP5.09□□□□□ -1.6
SCAF11-212ENST00000549162 PMLP29590 882 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 MAPK9P45984 424 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 ZC2HC1CQ53FD0 456 aaPredicted RBP5.09□□□□□ -1.6
SCAF11-212ENST00000549162 TRNP1Q6NT89 227 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 TTC30AQ86WT1 665 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 ALLCQ8N6M5 410 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 TLCD1Q96CP7 247 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 PDLIM5Q96HC4 596 aaKnown RBP5.09□□□□□ -1.6
SCAF11-212ENST00000549162 FCRL1Q96LA6 429 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 SIKE1Q9BRV8 207 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 HTATIP2Q9BUP3 242 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 NRDE2Q9H7Z3 1164 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 ACTR10Q9NZ32 417 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 ADAM28Q9UKQ2 775 aa5.09□□□□□ -1.6
SCAF11-212ENST00000549162 CEP192Q8TEP8 1941 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 LOC285095A0A1B0GVY8 99 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 ZSCAN5CA6NGD5 496 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 H0Y858 1186 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 NOP56O00567 594 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 LPXNO60711 386 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 FBXO24O75426 580 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 GLP2RO95838 553 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 ATF2P15336 505 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 FCARP24071 287 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 STIP1P31948 543 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 SERPINB5P36952 375 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 YARSP54577 528 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 PRKAA2P54646 552 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 RPL10AP62906 217 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 COL9A2Q14055 689 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 ZNF77Q15935 545 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 LRRC26Q2I0M4 334 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 C11orf91Q3C1V1 193 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 ALS2CLQ60I27 953 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 MON1AQ86VX9 555 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 B3GALNT2Q8NCR0 500 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 C3orf58Q8NDZ4 430 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 MFSD3Q96ES6 412 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 SMAD5Q99717 465 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 EPB41L4BQ9H329 900 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 GDE1Q9NZC3 331 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 TAGLN3Q9UI15 199 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 INSL6Q9Y581 213 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 M0QZ92 97 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 FOXN3O00409 490 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 AOC2O75106 756 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 MSL3P1P0C860 447 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 TRIM21P19474 475 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 GUCY2FP51841 1108 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 UBXN1Q04323 297 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 TMEM62Q0P6H9 643 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 GRIN2CQ14957 1233 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 MTFR1Q15390 333 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 ZRSR2Q15696 482 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 PTPN21Q16825 1174 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 BBS9Q3SYG4 887 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 PARP15Q460N3 678 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 NUGGCQ68CJ6 796 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 NSMFQ6X4W1 530 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 CYP2U1Q7Z449 544 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 SDR16C5Q8N3Y7 309 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 RNF149Q8NC42 400 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 PGM2Q96G03 612 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 EEF2KMTQ96G04 330 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 PIWIL1Q96J94 861 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 NOX5Q96PH1 765 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 MCCC1Q96RQ3 725 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 KCTD15Q96SI1 283 aaPredicted RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 NAT9Q9BTE0 207 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 LSM14BQ9BX40 385 aaKnown RBP5.08□□□□□ -1.6
SCAF11-212ENST00000549162 C1QTNF2Q9BXJ5 285 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 RAB6BQ9NRW1 208 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 RAD18Q9NS91 495 aa5.08□□□□□ -1.6
SCAF11-212ENST00000549162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.08□□□□□ -1.63e-7■■■□□ 15.3
SCAF11-212ENST00000549162 SYNDIG1LA6NDD5 238 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms