RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 CCDC185Q8N715 623 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 OSCP1Q8WVF1 389 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 C1orf74Q96LT6 269 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 PRMT1Q99873 361 aaKnown RBP13.57□□□□□ -0.24
DDX11-227ENST00000544652 KXD1Q9BQD3 176 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 FAM83CQ9BQN1 747 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 RPP25Q9BUL9 199 aaKnown RBP13.57□□□□□ -0.24
DDX11-227ENST00000544652 IRX2Q9BZI1 471 aaPredicted RBP13.57□□□□□ -0.24
DDX11-227ENST00000544652 KCNK12Q9HB15 430 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 TBC1D14Q9P2M4 693 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 FZD10Q9ULW2 581 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 USP18Q9UMW8 372 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 GUCA1BQ9UMX6 200 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 CAPN6Q9Y6Q1 641 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 COL6A3P12111 3177 aa13.57□□□□□ -0.24
DDX11-227ENST00000544652 NYNRINQ9P2P1 1898 aaKnown RBP13.57□□□□□ -0.24
DDX11-227ENST00000544652 SHROOM3Q8TF72 1996 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 GOLGA6L9A6NEM1 432 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 USP27XA6NNY8 438 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 SLC9A3R1O14745 358 aaPredicted RBP13.56□□□□□ -0.24
DDX11-227ENST00000544652 CHADO15335 359 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 PAGE1O75459 146 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 TCF4P15884 667 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 COMTP21964 271 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 IL1R2P27930 398 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 TAS2R40P59535 323 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 NRG1Q02297 640 aaPredicted RBP13.56□□□□□ -0.24
DDX11-227ENST00000544652 ARL13BQ3SXY8 428 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 FAM133BQ5BKY9 247 aaKnown RBP13.56□□□□□ -0.24
DDX11-227ENST00000544652 ARTNQ5T4W7 220 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 ADGRF1Q5T601 910 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 ERMARDQ5T6L9 678 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 NADSYN1Q6IA69 706 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 POLNQ7Z5Q5 900 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 DAAM2Q86T65 1068 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 SYCE1Q8N0S2 351 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 UBE2Q2Q8WVN8 375 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 TEKT4Q8WW24 435 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 CD101Q93033 1021 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 RNF34Q969K3 372 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 OSBPL2Q9H1P3 480 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.56□□□□□ -0.24
DDX11-227ENST00000544652 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 SLC12A6Q9UHW9 1150 aa13.56□□□□□ -0.24
DDX11-227ENST00000544652 XPO7Q9UIA9 1087 aaKnown RBP13.56□□□□□ -0.24
DDX11-227ENST00000544652 TMEM110-MUSTN1A8MSY1 372 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 ARNTLO00327 626 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 PRPSAP2O60256 369 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 PALMO75781 387 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 SLC6A4P31645 630 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 CHKAP35790 457 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 SLC11A2P49281 568 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 MLLT6P55198 1093 aaPredicted RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 NAP1L1P55209 391 aaKnown RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 HADHQ16836 314 aaKnown RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 EML3Q32P44 896 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 C5orf22Q49AR2 442 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 BOLA3Q53S33 107 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 MS4A13Q5J8X5 152 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 PIK3R6Q5UE93 754 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 LRRC38Q5VT99 294 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 TXNRD3NBQ6F5E7 133 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 SCYL2Q6P3W7 929 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 NT5DC3Q86UY8 548 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 ZNF683Q8IZ20 524 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 ADGRG2Q8IZP9 1017 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 SLC44A3Q8N4M1 653 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 ST13P5Q8NFI4 369 aaPredicted RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 FAM71BQ8TC56 605 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 RSAD2Q8WXG1 361 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 TRIM44Q96DX7 344 aaPredicted RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 ASIC4Q96FT7 647 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 SNRNP25Q9BV90 132 aaKnown RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 TRMT61BQ9BVS5 477 aaKnown RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 GOLPH3Q9H4A6 298 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 TMPRSS4Q9NRS4 437 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 THG1LQ9NWX6 298 aaKnown RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 DUS2Q9NX74 493 aaKnown RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 TRMT1Q9NXH9 659 aaKnown RBP13.55□□□□□ -0.24
DDX11-227ENST00000544652 PCSK1NQ9UHG2 260 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 ZKSCAN5Q9Y2L8 839 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 HS3ST4Q9Y661 456 aa13.55□□□□□ -0.24
DDX11-227ENST00000544652 MOCS2O96007 188 aaPredicted RBP13.54□□□□□ -0.24
DDX11-227ENST00000544652 KRT7P08729 469 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 RARAP10276 462 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 SEMA3BQ13214 749 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 GRM2Q14416 872 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 PDGFRLQ15198 375 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 MANEALQ5VSG8 457 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 RHOT1Q8IXI2 618 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 DDX50Q9BQ39 737 aaKnown RBP13.54□□□□□ -0.24
DDX11-227ENST00000544652 ZMYND15Q9H091 742 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 LINC00597Q9H2U6 94 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 TRPV5Q9NQA5 729 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 AP4E1Q9UPM8 1137 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 HYOU1Q9Y4L1 999 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 WNT6Q9Y6F9 365 aa13.54□□□□□ -0.24
DDX11-227ENST00000544652 IGLV3-10A0A075B6K4 115 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 GOLGA6L7A0A1B0GV03 622 aa13.53□□□□□ -0.24
DDX11-227ENST00000544652 SCAMP3O14828 347 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms