RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 PLAG1Q6DJT9 500 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 PTF1AQ7RTS3 328 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 NRSN1Q8IZ57 195 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 FAM109AQ8N4B1 249 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 TMEM57Q8N5G2 664 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.75□□□□□ -1.49
CIT-211ENST00000541841 C3orf49Q96BT1 292 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 NAF1Q96HR8 494 aaKnown RBP5.75□□□□□ -1.49
CIT-211ENST00000541841 TIGD1Q96MW7 591 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 ASB2Q96Q27 587 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 REEP2Q9BRK0 252 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 ALG8Q9BVK2 526 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 ACAD9Q9H845 621 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 PLSCR4Q9NRQ2 329 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 VPS28Q9UK41 221 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 PLEKHM1Q9Y4G2 1056 aa5.75□□□□□ -1.49
CIT-211ENST00000541841 RSF1Q96T23 1441 aaPredicted RBP5.74□□□□□ -1.49
CIT-211ENST00000541841 DCLK1O15075 740 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 PTP4A3O75365 173 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 PRKCGP05129 697 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 MST1P26927 711 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 LIPAP38571 399 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 CCT4P50991 539 aaKnown RBP5.74□□□□□ -1.49
CIT-211ENST00000541841 TRIM71Q2Q1W2 868 aaKnown RBP5.74□□□□□ -1.49
CIT-211ENST00000541841 FAXCQ5TGI0 409 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 FCRL6Q6DN72 434 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 NFRKBQ6P4R8 1299 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 USP17L6PQ6QN14 398 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 GET4Q7L5D6 327 aaPredicted RBP5.74□□□□□ -1.49
CIT-211ENST00000541841 MAVSQ7Z434 540 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 R3HCC1LQ7Z5L2 792 aaKnown RBP5.74□□□□□ -1.49
CIT-211ENST00000541841 KCTD20Q7Z5Y7 419 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 TBC1D22AQ8WUA7 517 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 RNF125Q96EQ8 232 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 SLC46A1Q96NT5 459 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 ABHD16BQ9H3Z7 469 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 ELAC1Q9H777 363 aaKnown RBP5.74□□□□□ -1.49
CIT-211ENST00000541841 ARHGEF3Q9NR81 526 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 SH3BP4Q9P0V3 963 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 XPR1Q9UBH6 696 aa5.74□□□□□ -1.49
CIT-211ENST00000541841 RRP7AQ9Y3A4 280 aaKnown RBP5.74□□□□□ -1.49
CIT-211ENST00000541841 E7EVH7 732 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 GCOM1H8Y6P7 765 aaPredicted RBP5.73□□□□□ -1.49
CIT-211ENST00000541841 PPP6R2O75170 966 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 STARD3NLO95772 234 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 GLP2RO95838 553 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 CSF1P09603 554 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 SRGAP2BP0DMP2 458 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 ALOX12P18054 663 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 HOXD13P35453 343 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 CPT1AP50416 773 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 ARF3P61204 181 aaPredicted RBP5.73□□□□□ -1.49
CIT-211ENST00000541841 ARF1P84077 181 aaKnown RBP5.73□□□□□ -1.49
CIT-211ENST00000541841 NSUN2Q08J23 767 aaKnown RBP eCLIP5.73□□□□□ -1.49
CIT-211ENST00000541841 TCF15Q12870 199 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 TAF11Q15544 211 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 SRSF7Q16629 238 aaKnown RBP eCLIP5.73□□□□□ -1.49
CIT-211ENST00000541841 ATPAF1Q5TC12 328 aaPredicted RBP5.73□□□□□ -1.49
CIT-211ENST00000541841 SNX30Q5VWJ9 437 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 SYT13Q7L8C5 426 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 ANKS1BQ7Z6G8 1248 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 CREB3L4Q8TEY5 395 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 SDCCAG3Q96C92 435 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 RADILQ96JH8 1075 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 VPS16Q9H269 839 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 SERTAD4Q9NUC0 356 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 ADD3Q9UEY8 706 aaKnown RBP5.73□□□□□ -1.49
CIT-211ENST00000541841 RGS17Q9UGC6 210 aaPredicted RBP5.73□□□□□ -1.49
CIT-211ENST00000541841 SERTAD3Q9UJW9 196 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 KCND3Q9UK17 655 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 TBX20Q9UMR3 447 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 CYP46A1Q9Y6A2 500 aa5.73□□□□□ -1.49
CIT-211ENST00000541841 LOC102723971A0A1B0GUV8 181 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 LINC01548A6NM66 108 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 TARM1B6A8C7 271 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 STX16-NPEPL1H3BU86 382 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 SMIM22K7EJ46 135 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 STX16O14662 325 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 ZNF213O14771 459 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 NTSR2O95665 410 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 ANXA6P08133 673 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 CNPP09543 421 aaKnown RBP5.72□□□□□ -1.49
CIT-211ENST00000541841 PIM1P11309 404 aaPredicted RBP5.72□□□□□ -1.49
CIT-211ENST00000541841 TPH1P17752 444 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 CHMP24386 653 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 PTDSS1P48651 473 aaKnown RBP5.72□□□□□ -1.49
CIT-211ENST00000541841 SOX10P56693 466 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 CUL4AQ13619 759 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 BMPR2Q13873 1038 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 ARHGEF7Q14155 803 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 GRM4Q14833 912 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 NPY5RQ15761 445 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 EPHA10Q5JZY3 1008 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 MRNIPQ6NTE8 343 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 RINT1Q6NUQ1 792 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 ZNF66Q6ZN08 573 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 RINLQ6ZS11 566 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 RAB11FIP2Q7L804 512 aa5.72□□□□□ -1.49
CIT-211ENST00000541841 ZNF551Q7Z340 670 aaPredicted RBP5.72□□□□□ -1.49
CIT-211ENST00000541841 RASGRP3Q8IV61 690 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms