RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 PGAP3Q96FM1 320 aaPredicted RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 BTN2A3PQ96KV6 586 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 PRICKLE1Q96MT3 831 aaPredicted RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 HHIPQ96QV1 700 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 NPY6RQ99463 290 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 SYT11Q9BT88 431 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 EDEM3Q9BZQ6 932 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 FAM204AQ9H8W3 233 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 POLR3BQ9NW08 1133 aaPredicted RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 DDIT4Q9NX09 232 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 USP34Q70CQ2 3546 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 GOLGA6L19H0YKK7 550 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 SGK1O00141 431 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 NPC1O15118 1278 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 HNRNPLP14866 589 aaKnown RBP eCLIP13.6□□□□□ -0.23
LTBR-208ENST00000541005 HOXC13P31276 330 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 GBP1P32455 592 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 TIE1P35590 1138 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 PBX1P40424 430 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 SGSHP51688 502 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 FANCCQ00597 558 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 CLEC16AQ2KHT3 1053 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 ZC3H12AQ5D1E8 599 aaKnown RBP13.6□□□□□ -0.23
LTBR-208ENST00000541005 FAM102AQ5T9C2 384 aaPredicted RBP13.6□□□□□ -0.23
LTBR-208ENST00000541005 EMC10Q5UCC4 262 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 EGFLAMQ63HQ2 1017 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 RFWD3Q6PCD5 774 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 BNIPLQ7Z465 357 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 IRF2BP2Q7Z5L9 587 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 KIAA0907Q7Z7F0 614 aaPredicted RBP13.6□□□□□ -0.23
LTBR-208ENST00000541005 RASSF3Q86WH2 238 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 PHF13Q86YI8 300 aaPredicted RBP13.6□□□□□ -0.23
LTBR-208ENST00000541005 CCDC33Q8N5R6 958 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 ZNF557Q8N988 423 aaPredicted RBP13.6□□□□□ -0.23
LTBR-208ENST00000541005 TXNDC5Q8NBS9 432 aaKnown RBP13.6□□□□□ -0.23
LTBR-208ENST00000541005 TSTD1Q8NFU3 115 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 OLIG1Q8TAK6 271 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 TMA16Q96EY4 203 aaKnown RBP13.6□□□□□ -0.23
LTBR-208ENST00000541005 PCDHB18PQ96TA0 734 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.6□□□□□ -0.23
LTBR-208ENST00000541005 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.6□□□□□ -0.23
LTBR-208ENST00000541005 TMEM59LQ9UK28 342 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 CLEC4EQ9ULY5 219 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 STAP1Q9ULZ2 295 aa13.6□□□□□ -0.23
LTBR-208ENST00000541005 DMDP11532 3685 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 SPTBN4Q9H254 2564 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 GOLGA6L7A0A1B0GV03 622 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 HLA-FP30511 346 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 NTSR1P30989 418 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 CCR1P32246 355 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 ARID5AQ03989 594 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 PTP4A2Q12974 167 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 ENPP2Q13822 863 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 E2F5Q15329 346 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 GEN1Q17RS7 908 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 SLC25A52Q3SY17 297 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 MS4A13Q5J8X5 152 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 HEATR6Q6AI08 1181 aaKnown RBP13.59□□□□□ -0.23
LTBR-208ENST00000541005 TMEM92Q6UXU6 159 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 MMS22LQ6ZRQ5 1243 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 ATP6V0D2Q8N8Y2 350 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 WFIKKN2Q8TEU8 576 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 GAB3Q8WWW8 586 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 PRMT1Q99873 361 aaKnown RBP13.59□□□□□ -0.23
LTBR-208ENST00000541005 GABRG3Q99928 467 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 AGPAT1Q99943 283 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 ADAM33Q9BZ11 813 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 NUCKS1Q9H1E3 243 aaKnown RBP13.59□□□□□ -0.23
LTBR-208ENST00000541005 CD248Q9HCU0 757 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 AIPL1Q9NZN9 384 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 CALCOCO1Q9P1Z2 691 aa13.59□□□□□ -0.23
LTBR-208ENST00000541005 XPO7Q9UIA9 1087 aaKnown RBP13.59□□□□□ -0.23
LTBR-208ENST00000541005 SMG5Q9UPR3 1016 aaKnown RBP13.59□□□□□ -0.23
LTBR-208ENST00000541005 TYW5A2RUC4 315 aaKnown RBP13.58□□□□□ -0.24
LTBR-208ENST00000541005 LRRC53A6NM62 1247 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 M0QYT0 321 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 AXIN1O15169 862 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 HRO43593 1189 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 TIMM44O43615 452 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 TSPAN3O60637 253 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 MOCS2O96007 188 aaPredicted RBP13.58□□□□□ -0.24
LTBR-208ENST00000541005 F9P00740 461 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 ABCB4P21439 1286 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 FLT3P36888 993 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 PRKCIP41743 596 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 NSFP46459 744 aaKnown RBP13.58□□□□□ -0.24
LTBR-208ENST00000541005 CXCR3P49682 368 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 UBASH3AP57075 661 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 C2CD6Q53TS8 623 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 BRMS1LQ5PSV4 323 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 TRNP1Q6NT89 227 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 MON1BQ7L1V2 547 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 SLC30A5Q8TAD4 765 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 UCMAQ8WVF2 138 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 IQCDQ96DY2 449 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 C11orf70Q9BRQ4 267 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 NUP58Q9BVL2 599 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms