RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 TAAR1Q96RJ0 339 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 MRPL1Q9BYD6 325 aaKnown RBP9.65□□□□□ -0.86
LDHA-218ENST00000540430 GRIP2Q9C0E4 1043 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 NKX2-4Q9H2Z4 354 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 ACP6Q9NPH0 428 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 MKS1Q9NXB0 559 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 SIRPGQ9P1W8 387 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 COL20A1Q9P218 1284 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 YBX2Q9Y2T7 364 aaKnown RBP9.65□□□□□ -0.86
LDHA-218ENST00000540430 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 PCDHA11Q9Y5I1 949 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 CEPT1Q9Y6K0 416 aa9.65□□□□□ -0.86
LDHA-218ENST00000540430 LOXHD1Q8IVV2 1947 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 SF3B1O75533 1304 aaKnown RBP eCLIP9.65□□□□□ -0.879e-7■■□□□ 11.6
LDHA-218ENST00000540430 ZBBXA8MT70 800 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 H3BNX3 289 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 GOLGA8RI6L899 631 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 FOSP01100 380 aaPredicted RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 MAPTP10636 758 aaKnown RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 SSTR1P30872 391 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 SREBF1P36956 1147 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 CDK9P50750 372 aaKnown RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 VCPP55072 806 aaKnown RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 BFSP2Q13515 415 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 EFTUD2Q15029 972 aaKnown RBP eCLIP9.65□□□□□ -0.87
LDHA-218ENST00000540430 GRAMD1BQ3KR37 738 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 TEX44Q53QW1 395 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 HP1BP3Q5SSJ5 553 aaPredicted RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 ODR4Q5SWX8 454 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 ARID3BQ8IVW6 561 aaPredicted RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 DEPTORQ8TB45 409 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 PRPF31Q8WWY3 499 aaKnown RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 E2F7Q96AV8 911 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 SNX27Q96L92 541 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 AMNQ9BXJ7 453 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 TMEM117Q9H0C3 514 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 C12orf65Q9H3J6 166 aaKnown RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 MRPL47Q9HD33 250 aaKnown RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 UBAP1Q9NZ09 502 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 RSL24D1Q9UHA3 163 aaKnown RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 CDH22Q9UJ99 828 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 CROTQ9UKG9 612 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 PSMD13Q9UNM6 376 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 FAF1Q9UNN5 650 aaPredicted RBP9.65□□□□□ -0.87
LDHA-218ENST00000540430 INPP5FQ9Y2H2 1132 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 SQORQ9Y6N5 450 aa9.65□□□□□ -0.87
LDHA-218ENST00000540430 SCN5AQ14524 2016 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 TANC1Q9C0D5 1861 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 MEIS2O14770 477 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 MAGEB3O15480 346 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 SNNO75324 88 aaPredicted RBP9.64□□□□□ -0.87
LDHA-218ENST00000540430 SPAG6O75602 509 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 MMP3P08254 477 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 FAM58BPP0C7Q3 252 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 MYL4P12829 197 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 SERPINB6P35237 376 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 GPC3P51654 580 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 COPAP53621 1224 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 AQP5P55064 265 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 GHRHRQ02643 423 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 ARHGAP1Q07960 439 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 BST1Q10588 318 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 PTK7Q13308 1070 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 CNGA3Q16281 694 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 TJAP1Q5JTD0 557 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 RARS2Q5T160 578 aaKnown RBP9.64□□□□□ -0.87
LDHA-218ENST00000540430 ARHGEF16Q5VV41 709 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 ENOSF1Q7L5Y1 443 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 DEFB128Q7Z7B8 93 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 ANKMY2Q8IV38 441 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 PALM2Q8IXS6 379 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 RDH13Q8NBN7 331 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 AFG1LQ8WV93 481 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 SLC44A1Q8WWI5 657 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 HSPBAP1Q96EW2 488 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 DCUN1D1Q96GG9 259 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 ACAP3Q96P50 834 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 GCNAQ96QF7 691 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 UIMC1Q96RL1 719 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 HNRNPABQ99729 332 aaKnown RBP9.64□□□□□ -0.87
LDHA-218ENST00000540430 FAM118BQ9BPY3 351 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 HAUS8Q9BT25 410 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 ADAM33Q9BZ11 813 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 PFDN4Q9NQP4 134 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 MAP3K20Q9NYL2 800 aaKnown RBP9.64□□□□□ -0.87
LDHA-218ENST00000540430 NOD1Q9Y239 953 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 POMPQ9Y244 141 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 HBS1LQ9Y450 684 aaKnown RBP9.64□□□□□ -0.87
LDHA-218ENST00000540430 IKBKGQ9Y6K9 419 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 BDP1A6H8Y1 2624 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 CAPN8A6NHC0 703 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 COPEO14579 308 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 MSH4O15457 936 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 ZBED1O96006 694 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 IQCF3P0C7M6 154 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 ZSCAN5DPP0CG00 497 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 SRGAP2CP0DJJ0 459 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 SRGAP2BP0DMP2 458 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 ERFP50548 548 aa9.64□□□□□ -0.87
LDHA-218ENST00000540430 HSD17B4P51659 736 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms