RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CCDC138Q96M89 665 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 PANX3Q96QZ0 392 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 LXNQ9BS40 222 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 C10orf88Q9H8K7 445 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 SIX2Q9NPC8 291 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 KCNK4Q9NYG8 393 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 AP4B1Q9Y6B7 739 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 SLC16A4O15374 487 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 SLC26A4O43511 780 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 IQCF3P0C7M6 154 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 SNHG28P0DPA3 235 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 SFNP31947 248 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 SLC26A2P50443 739 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 ARPC4P59998 168 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 PRAMEP78395 509 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 CDC42EP1Q00587 391 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 STX3Q13277 289 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 C2CD6Q53TS8 623 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 TNFAIP8L3Q5GJ75 292 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 C6orf183Q5T699 404 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 PLEKHA7Q6IQ23 1121 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 TMC7Q7Z402 723 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 KIAA2013Q8IYS2 634 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 DEFB107AQ8IZN7 70 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 PPM1NQ8N819 430 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 TSPAN14Q8NG11 270 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 KAT5Q92993 513 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 AZIN2Q96A70 460 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 RAD9AQ99638 391 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 SENP7Q9BQF6 1050 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 ADPGKQ9BRR6 497 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 POLR3CQ9BUI4 534 aaPredicted RBP8.94□□□□□ -0.98
DDB1-217ENST00000540166 ENTPD7Q9NQZ7 604 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 C1orf112Q9NSG2 853 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 ATAD3AQ9NVI7 634 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 FAIMQ9NVQ4 179 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 GTF2IRD1Q9UHL9 959 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 PITPNM1O00562 1244 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 KRT1P04264 644 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 KRT10P13645 584 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 CD58P19256 250 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 ATXN3P54252 364 aaPredicted RBP8.94□□□□□ -0.98
DDB1-217ENST00000540166 JAM2P57087 298 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 DCUN1D2Q6PH85 259 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 ZBTB8OSQ8IWT0 167 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 RHOT1Q8IXI2 618 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 APBB2Q92870 758 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 ELMO3Q96BJ8 720 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 OSBPL6Q9BZF3 934 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 TUFT1Q9NNX1 390 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 GTF3C4Q9UKN8 822 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 RWDD3Q9Y3V2 267 aa8.94□□□□□ -0.98
DDB1-217ENST00000540166 GOLGA8TH3BQL2 631 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 BAIAP3O94812 1187 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 APOEP02649 317 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 GPM6BQ13491 265 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 FSCBQ5H9T9 825 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 TMEM240Q5SV17 173 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 GDF6Q6KF10 455 aaPredicted RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 PCGF5Q86SE9 256 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 ARHGEF19Q8IW93 802 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 GAB3Q8WWW8 586 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 FTHL17Q9BXU8 183 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 MAK16Q9BXY0 300 aaKnown RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 C12orf65Q9H3J6 166 aaKnown RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 TXNDC16Q9P2K2 825 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 SLC17A7Q9P2U7 560 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 GNEQ9Y223 722 aaKnown RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 RBMX2Q9Y388 322 aaKnown RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 TTLL13PA6NNM8 815 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 TBKBP1A7MCY6 615 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 H3BSA7 217 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 FBP2O00757 339 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 MEIS2O14770 477 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 IDO1P14902 403 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 ALDH7A1P49419 539 aaKnown RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 DYNLT1P63172 113 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 FLOT2Q14254 428 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 TAF12Q16514 161 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 ZNF484Q5JVG2 852 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 TMEM63BQ5T3F8 832 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 SLC47A2Q86VL8 602 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 HERC6Q8IVU3 1022 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 ZFP28Q8NHY6 868 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 PTCD3Q96EY7 689 aaKnown RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 TRIM11Q96F44 468 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 CBWD1Q9BRT8 395 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 UPF3AQ9H1J1 476 aaKnown RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 TRPC7Q9HCX4 862 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 SCHIP1Q9P0W5 487 aaPredicted RBP8.93□□□□□ -0.98
DDB1-217ENST00000540166 PCDHA11Q9Y5I1 949 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 TRPV2Q9Y5S1 764 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 TMEM265A0A087WTH1 108 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 ARHGEF37A1IGU5 675 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 TMEM221A6NGB7 291 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 TISP43B9A030 160 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 FSCN2O14926 492 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 TREHO43280 583 aa8.93□□□□□ -0.98
DDB1-217ENST00000540166 PIAS1O75925 651 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms