RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 ACAD9Q9H845 621 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 UCK1Q9HA47 277 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 SCUBE2Q9NQ36 999 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 MRGBPQ9NV56 204 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 MRPL39Q9NYK5 338 aaKnown RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 MAP3K20Q9NYL2 800 aaKnown RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 DTLQ9NZJ0 730 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 DNMT3BQ9UBC3 853 aaKnown RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 APEX2Q9UBZ4 518 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 TBK1Q9UHD2 729 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 CDH22Q9UJ99 828 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 LHX6Q9UPM6 363 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 POMPQ9Y244 141 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 RTCBQ9Y3I0 505 aaKnown RBP6.31□□□□□ -1.4
SNHG1-211ENST00000539921 FLT4P35916 1363 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 HEG1Q9ULI3 1381 aa6.31□□□□□ -1.4
SNHG1-211ENST00000539921 A0A0G2JND7 137 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 C1orf232A0A0U1RR37 186 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ARHGEF37A1IGU5 675 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 SAC3D1A6NKF1 404 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 MEI4A8MW99 385 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 hCG_2039718K7EN88 272 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 EEF2KO00418 725 aaKnown RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 TRDMT1O14717 391 aaKnown RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ZNF213O14771 459 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 PI15O43692 258 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 DAB1O75553 588 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 TOM1L1O75674 476 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 NOL4O94818 638 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 SLITRK5O94991 958 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 EPN2O95208 641 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ATE1O95260 518 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 GSNP06396 782 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 CAPN1P07384 714 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 RETP07949 1114 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 KRT7P08729 469 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 CDH1P12830 882 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 CREB1P16220 341 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 RFX1P22670 979 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 HSD17B2P37059 387 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 DDOSTP39656 456 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 HADHAP40939 763 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 SERPINB10P48595 397 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 CENPAP49450 140 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 CLK2P49760 499 aaKnown RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 KLK7P49862 253 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 HIRAP54198 1017 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 PEX3P56589 373 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 GALK2Q01415 458 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 CENPCQ03188 943 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 MRPL28Q13084 256 aaKnown RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 SP140Q13342 867 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ITGADQ13349 1161 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 PPIL2Q13356 520 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 DSC3Q14574 896 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ARHGAP44Q17R89 818 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ZNF181Q2M3W8 571 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ALFQ53S48 1182 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 FSCBQ5H9T9 825 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 EFHC2Q5JST6 749 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ZNF544Q6NX49 715 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ZCCHC8Q6NZY4 707 aaKnown RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 SH3BP5LQ7L8J4 393 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 OTOP3Q7RTS5 596 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 C11orf96Q7Z7L8 435 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 TMEM151BQ8IW70 566 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 CCDC60Q8IWA6 550 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 CDH26Q8IXH8 852 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 PALM2Q8IXS6 379 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ADGRG5Q8IZF4 528 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 LINC00518Q8N0U6 118 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 FBXW8Q8N3Y1 598 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ZCCHC9Q8N567 271 aaKnown RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 KIAA1958Q8N8K9 716 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 ATAD1Q8NBU5 361 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 PJA1Q8NG27 643 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 OR13F1Q8NGS4 319 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 IGDCC4Q8TDY8 1250 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 PXYLP1Q8TE99 480 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 TGFBRAP1Q8WUH2 860 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 PYDC1Q8WXC3 89 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 KLHL6Q8WZ60 621 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 TANKQ92844 425 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 TOE1Q96GM8 510 aaKnown RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 SH3YL1Q96HL8 342 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 FEM1CQ96JP0 617 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 CNBD2Q96M20 576 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 UHRF1Q96T88 793 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 C17orf62Q9BQA9 187 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 NUDT12Q9BQG2 462 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 TMEM79Q9BSE2 394 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 MXD3Q9BW11 206 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 EMILIN2Q9BXX0 1053 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 PDGFDQ9GZP0 370 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 NMUR2Q9GZQ4 415 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 DNAI2Q9GZS0 605 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 MUC3BQ9H195 1237 aa6.3□□□□□ -1.4
SNHG1-211ENST00000539921 TRIT1Q9H3H1 467 aaKnown RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 QTRT2Q9H974 415 aaKnown RBP6.3□□□□□ -1.4
SNHG1-211ENST00000539921 RC3H2Q9HBD1 1191 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms