RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 L1CAMP32004 1257 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 GCLMP48507 274 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 STAT2P52630 851 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 TNK2Q07912 1038 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 FLOT2Q14254 428 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 PCSK7Q16549 785 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 HIF1AQ16665 826 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 CENPUQ71F23 418 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 ITIH5Q86UX2 942 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 CATSPER3Q86XQ3 398 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 ELMOD1Q8N336 334 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 DTX3Q8N9I9 347 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 ATP6V1E2Q96A05 226 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 KREMEN1Q96MU8 473 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 OSBPL11Q9BXB4 747 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 NPLQ9BXD5 320 aaPredicted RBP10.99□□□□□ -0.65
RTN3-208ENST00000537981 RAB34Q9BZG1 259 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 TGIF2Q9GZN2 237 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 GLT8D2Q9H1C3 349 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 PALMDQ9NP74 551 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 HACD3Q9P035 362 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 SCHIP1Q9P0W5 487 aaPredicted RBP10.99□□□□□ -0.65
RTN3-208ENST00000537981 GNPTGQ9UJJ9 305 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 DNAJC16Q9Y2G8 782 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 TRAF6Q9Y4K3 522 aa10.99□□□□□ -0.65
RTN3-208ENST00000537981 TRIM49D1C9J1S8 452 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 COPEO14579 308 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 TNPO2O14787 897 aaKnown RBP10.98□□□□□ -0.65
RTN3-208ENST00000537981 AVILO75366 819 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 ATF7P17544 494 aaPredicted RBP10.98□□□□□ -0.65
RTN3-208ENST00000537981 HPCAL1P37235 193 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 YAP1P46937 504 aaKnown RBP10.98□□□□□ -0.65
RTN3-208ENST00000537981 CLCQ05315 142 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 SLC18A2Q05940 514 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 PPP3CAQ08209 521 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 RAB39AQ14964 217 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 STILQ15468 1287 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 PARP10Q53GL7 1025 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 C16orf46Q6P387 395 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 PIWIL3Q7Z3Z3 882 aaKnown RBP10.98□□□□□ -0.65
RTN3-208ENST00000537981 PODNQ7Z5L7 613 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 NUDCD3Q8IVD9 361 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 SGF29Q96ES7 293 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 APBA2Q99767 749 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 FERMT1Q9BQL6 677 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 B3GNT4Q9C0J1 378 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 NRDE2Q9H7Z3 1164 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 SCUBE2Q9NQ36 999 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 RIC8BQ9NVN3 520 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 PCNTO95613 3336 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 UTRNP46939 3433 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 SLC16A3O15427 465 aaKnown RBP10.98□□□□□ -0.65
RTN3-208ENST00000537981 CFLARO15519 480 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 ICMTO60725 284 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 TOM1L1O75674 476 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 GABBR2O75899 941 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 RGS20O76081 388 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 DDHD2O94830 711 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 GRK2P25098 689 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 PSMC2P35998 433 aaKnown RBP10.98□□□□□ -0.65
RTN3-208ENST00000537981 OPRL1P41146 370 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 STX3Q13277 289 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 ZBED5Q49AG3 693 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 CCSAPQ6IQ19 270 aaPredicted RBP10.98□□□□□ -0.65
RTN3-208ENST00000537981 KRT80Q6KB66 452 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 KCTD1Q719H9 257 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 CRLF3Q8IUI8 442 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 MMAAQ8IVH4 418 aaKnown RBP10.98□□□□□ -0.65
RTN3-208ENST00000537981 NATD1Q8N6N6 113 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 GOLM1Q8NBJ4 401 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 CPA5Q8WXQ8 436 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 LRTOMTQ8WZ04 291 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 MOCOSQ96EN8 888 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 PPP1R36Q96LQ0 422 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 NLRP4Q96MN2 994 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 CIB1Q99828 191 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 PCIF1Q9H4Z3 704 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 PARVBQ9HBI1 364 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 ACSS2Q9NR19 701 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 ARHGAP26Q9UNA1 814 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 DGKBQ9Y6T7 804 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 CNTNAP2Q9UHC6 1331 aa10.98□□□□□ -0.65
RTN3-208ENST00000537981 TANC1Q9C0D5 1861 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 PRSS51A0A1B0GVH4 220 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 TCRBV9S1A1TA0A576 114 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 KLF11O14901 512 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 AXIN1O15169 862 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 SNNO75324 88 aaPredicted RBP10.97□□□□□ -0.65
RTN3-208ENST00000537981 TPPPO94811 219 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 KRT75O95678 551 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 BPNT1O95861 308 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 AMHP03971 560 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 CKMT2P17540 419 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 DDX5P17844 614 aaKnown RBP10.97□□□□□ -0.65
RTN3-208ENST00000537981 PRKACBP22694 351 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 KLRK1P26718 216 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 MAPK1P28482 360 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 ARL1P40616 181 aaPredicted RBP10.97□□□□□ -0.65
RTN3-208ENST00000537981 QARSP47897 775 aaKnown RBP10.97□□□□□ -0.65
RTN3-208ENST00000537981 GPC3P51654 580 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms