RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PEX2P28328 305 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 FDFT1P37268 417 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 CHN2P52757 468 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 EPHB1P54762 984 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 AQP4P55087 323 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 CDH8P55286 799 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 LAMTOR4Q0VGL1 99 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 MAP7Q14244 749 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 PDK3Q15120 406 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 C15orf59Q2T9L4 293 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-218ENST00000537641 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-218ENST00000537641 ATF7IP2Q5U623 682 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 UGT2A3Q6UWM9 527 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 PACS1Q6VY07 963 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 DENND5BQ6ZUT9 1274 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 TMEM126BQ8IUX1 230 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 FBXW8Q8N3Y1 598 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 MARVELD2Q8N4S9 558 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 B4GALNT2Q8NHY0 566 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 RNF217Q8TC41 542 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 EZH1Q92800 747 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-218ENST00000537641 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 EPAS1Q99814 870 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 SNRNP25Q9BV90 132 aaKnown RBP12.51□□□□□ -0.41
CPSF7-218ENST00000537641 ELP3Q9H9T3 547 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 RPF1Q9H9Y2 349 aaKnown RBP12.51□□□□□ -0.41
CPSF7-218ENST00000537641 IFT122Q9HBG6 1241 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 XPNPEP3Q9NQH7 507 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 C6orf203Q9P0P8 240 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-218ENST00000537641 ATXN10Q9UBB4 475 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 MORF4L1Q9UBU8 362 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 TMCO1Q9UM00 188 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 ARHGAP26Q9UNA1 814 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 POMPQ9Y244 141 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 HEY1Q9Y5J3 304 aa12.51□□□□□ -0.41
CPSF7-218ENST00000537641 TPP1O14773 563 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 CREB3O43889 395 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 LGR5O75473 907 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 DDNO94850 711 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-218ENST00000537641 PROCP04070 461 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 RGS2P41220 211 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 GARSP41250 739 aaKnown RBP12.5□□□□□ -0.41
CPSF7-218ENST00000537641 GRIA2P42262 883 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 NR2C2P49116 596 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 MTTPP55157 894 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 ABCE1P61221 599 aaKnown RBP12.5□□□□□ -0.41
CPSF7-218ENST00000537641 INCA1Q0VD86 236 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 TRIP10Q15642 601 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 MMEL1Q495T6 779 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 CCDC14Q49A88 953 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 LRRC23Q53EV4 343 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-218ENST00000537641 RALGPS1Q5JS13 557 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 SH3PXD2AQ5TCZ1 1133 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 LPCAT4Q643R3 524 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 LCLAT1Q6UWP7 414 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 MAVSQ7Z434 540 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 ANKRD13AQ8IZ07 590 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 MPP5Q8N3R9 675 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 POU5F2Q8N7G0 328 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 C1orf127Q8N9H9 656 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 ICA1LQ8NDH6 482 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 SORT1Q99523 831 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 RTKNQ9BST9 563 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 Q9H521 79 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 EIF2B3Q9NR50 452 aaKnown RBP12.5□□□□□ -0.41
CPSF7-218ENST00000537641 PLK2Q9NYY3 685 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 HMGXB4Q9UGU5 601 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 PRPF19Q9UMS4 504 aaKnown RBP12.5□□□□□ -0.41
CPSF7-218ENST00000537641 PSMD13Q9UNM6 376 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 DTNAQ9Y4J8 743 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 KAT6AQ92794 2004 aa12.5□□□□□ -0.41
CPSF7-218ENST00000537641 IGKV6-21A0A0C4DH24 114 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 ZNF195O14628 629 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 DENRO43583 198 aaKnown RBP12.49□□□□□ -0.41
CPSF7-218ENST00000537641 PDE5AO76074 875 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 ALDOAP04075 364 aaKnown RBP12.49□□□□□ -0.41
CPSF7-218ENST00000537641 VAV1P15498 845 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 RAG1P15918 1043 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 MX2P20592 715 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 CYP2F1P24903 491 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 SDC4P31431 198 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 TBL3Q12788 808 aaKnown RBP12.49□□□□□ -0.41
CPSF7-218ENST00000537641 PDE1CQ14123 709 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-218ENST00000537641 CDO1Q16878 200 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 CCDC153Q494R4 210 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 CELF3Q5SZQ8 465 aaKnown RBP12.49□□□□□ -0.41
CPSF7-218ENST00000537641 C16orf46Q6P387 395 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 DLK2Q6UY11 383 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 PLPPR4Q7Z2D5 763 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 KBTBD6Q86V97 674 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 HACE1Q8IYU2 909 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 DEFB107AQ8IZN7 70 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 RNF149Q8NC42 400 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 CATSPER1Q8NEC5 780 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 SHKBP1Q8TBC3 707 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 GPR20Q99678 358 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 NAT9Q9BTE0 207 aa12.49□□□□□ -0.41
CPSF7-218ENST00000537641 CDT1Q9H211 546 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms