RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 PIAS3Q9Y6X2 628 aa7.47□□□□□ -1.21
YBX3-206ENST00000536823 DMXL1Q9Y485 3027 aa7.47□□□□□ -1.21
YBX3-206ENST00000536823 ATP8B3O60423 1300 aa7.47□□□□□ -1.21
YBX3-206ENST00000536823 HELZP42694 1942 aaKnown RBP7.46□□□□□ -1.21
YBX3-206ENST00000536823 MYH10P35580 1976 aa7.46□□□□□ -1.21
YBX3-206ENST00000536823 A8MXQ7 604 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 F8VP50 259 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 CETN3O15182 167 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 NCAM2O15394 837 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 KINO60870 393 aaKnown RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 FAM87AP0C7U9 286 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 EPB41P11171 864 aaKnown RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 ANXA13P27216 316 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 MAOBP27338 520 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 GTF2H1P32780 548 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 PSMC2P35998 433 aaKnown RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 PRCPP42785 496 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 RPS9P46781 194 aaKnown RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 GCLMP48507 274 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 MXI1P50539 228 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 MLLT6P55198 1093 aaPredicted RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 CDH8P55286 799 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 NOP14P78316 857 aaKnown RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 PPP3CAQ08209 521 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 ADAM9Q13443 819 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 ZNF268Q14587 947 aaPredicted RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 SGSM1Q2NKQ1 1148 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 ZNF658Q5TYW1 1059 aaPredicted RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 C1orf228Q6PIY5 440 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 DENND5BQ6ZUT9 1274 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 C1orf210Q8IVY1 113 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 ZC3H3Q8IXZ2 948 aaKnown RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 ELOA2Q8IYF1 753 aaPredicted RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 CSGALNACT1Q8TDX6 532 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 USP13Q92995 863 aaPredicted RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 SMARCE1Q969G3 411 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 ELMO3Q96BJ8 720 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 TNIP3Q96KP6 325 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 C8orf48Q96LL4 319 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 NELL2Q99435 816 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 B3GNT5Q9BYG0 378 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 IMPG2Q9BZV3 1241 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 ZNF518BQ9C0D4 1074 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 SDCBP2Q9H190 292 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 GSX1Q9H4S2 264 aaPredicted RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 C8orf33Q9H7E9 229 aaPredicted RBP7.46□□□□□ -1.22
YBX3-206ENST00000536823 TMEM8AQ9HCN3 771 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 TRPC7Q9HCX4 862 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 TDP1Q9NUW8 608 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 TMEM30AQ9NV96 361 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 CCL26Q9Y258 94 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 PCDHA5Q9Y5H7 936 aa7.46□□□□□ -1.22
YBX3-206ENST00000536823 SPTBN2O15020 2390 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 TRAV19A0A0A6YYK7 116 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 SPECC1L-ADORA2AF8WAN1 911 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 CLDN5O00501 218 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 SLC16A3O15427 465 aaKnown RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 STX10O60499 249 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 CKMP06732 381 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 C1QTNF9P0C862 333 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 PFKLP17858 780 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 CCNE1P24864 410 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 GRIA4P48058 902 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 SOX9P48436 509 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 KPNA1P52294 538 aaPredicted RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 NDST1P52848 882 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 CACNA2D1P54289 1103 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 FANCCQ00597 558 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 INCA1Q0VD86 236 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 SPOPLQ6IQ16 392 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 FRMD5Q7Z6J6 570 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 UNC93AQ86WB7 457 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 RALGPS2Q86X27 583 aaPredicted RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 MAML2Q8IZL2 1156 aaPredicted RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 RIN3Q8TB24 985 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 TAS1R2Q8TE23 839 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 FAM3CQ92520 227 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 ERCC4Q92889 916 aaPredicted RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 EEF2KMTQ96G04 330 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 SMARCD1Q96GM5 515 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 ZFYVE19Q96K21 471 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 SLC22A12Q96S37 553 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 TSG101Q99816 390 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 IER2Q9BTL4 223 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 CYP3A43Q9HB55 503 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 APOBEC3GQ9HC16 384 aaKnown RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 DMAP1Q9NPF5 467 aaPredicted RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 PRMT8Q9NR22 394 aaPredicted RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 SPATA6Q9NWH7 488 aaPredicted RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 THG1LQ9NWX6 298 aaKnown RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 EHD2Q9NZN4 543 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 TRPM5Q9NZQ8 1165 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 GCNT4Q9P109 453 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 HMGXB4Q9UGU5 601 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 NDRG2Q9UN36 371 aaKnown RBP7.45□□□□□ -1.22
YBX3-206ENST00000536823 SDK1Q7Z5N4 2213 aa7.45□□□□□ -1.22
YBX3-206ENST00000536823 CACNA1AO00555 2505 aa7.44□□□□□ -1.22
YBX3-206ENST00000536823 ATG2BQ96BY7 2078 aa7.44□□□□□ -1.22
YBX3-206ENST00000536823 C2orf78A6NCI8 922 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms