RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 ANKRD18BA2A2Z9 1011 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 CLEC18AA5D8T8 446 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 A6NNC1 897 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 BTBD18B2RXH4 712 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 PHGDHO43175 533 aaKnown RBP2.84□□□□□ -1.95
SKA3-207ENST00000536239 CCP110O43303 1012 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 CA12O43570 354 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 PARP1P09874 1014 aaKnown RBP2.84□□□□□ -1.95
SKA3-207ENST00000536239 CD151P48509 253 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 IRX1P78414 480 aaPredicted RBP2.84□□□□□ -1.95
SKA3-207ENST00000536239 BIRC2Q13490 618 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 SHBQ15464 509 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 CDC37Q16543 378 aaPredicted RBP2.84□□□□□ -1.95
SKA3-207ENST00000536239 ANO6Q4KMQ2 910 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 FAM76BQ5HYJ3 339 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 JAKMIP3Q5VZ66 844 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 USP49Q70CQ1 688 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 SKAP1Q86WV1 359 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 C11orf44Q8N8P7 122 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 CLEC18CQ8NCF0 446 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 TMEM174Q8WUU8 243 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 WBP2Q969T9 261 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 CDT1Q9H211 546 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 VPS45Q9NRW7 570 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 CHMP5Q9NZZ3 219 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 CWC15Q9P013 229 aaKnown RBP2.84□□□□□ -1.95
SKA3-207ENST00000536239 JRKLQ9Y4A0 524 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 MMP24Q9Y5R2 645 aa2.84□□□□□ -1.95
SKA3-207ENST00000536239 KANK1Q14678 1352 aa2.84□□□□□ -1.96
SKA3-207ENST00000536239 KTN1Q86UP2 1357 aaKnown RBP2.84□□□□□ -1.96
SKA3-207ENST00000536239 AKNAQ7Z591 1439 aa2.84□□□□□ -1.96
SKA3-207ENST00000536239 CEP164Q9UPV0 1460 aa2.84□□□□□ -1.96
SKA3-207ENST00000536239 RAD54L2Q9Y4B4 1467 aa2.84□□□□□ -1.96
SKA3-207ENST00000536239 SMTNL1A8MU46 457 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 H7C4K7 107 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 SNUPNO95149 360 aaKnown RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 IL33O95760 270 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 TMIGD3P0DMS9 266 aaPredicted RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 AKAP5P24588 427 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 MAP2K2P36507 400 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 HNRNPH2P55795 449 aaKnown RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 EIF4A1P60842 406 aaKnown RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 ZSCAN26Q16670 478 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 HSP90B2PQ58FF3 399 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 TMEM240Q5SV17 173 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 SPSB3Q6PJ21 355 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 KRT222Q8N1A0 295 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 TXLNBQ8N3L3 684 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 FAM184AQ8NB25 1140 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 ANKRD20A12PQ8NF67 263 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 SNRNP27Q8WVK2 155 aaKnown RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 INPP5DQ92835 1189 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 HPS3Q969F9 1004 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 SPSB4Q96A44 273 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 PRR11Q96HE9 360 aaPredicted RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 WDR83Q9BRX9 315 aaKnown RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 ZNF518BQ9C0D4 1074 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 TMX4Q9H1E5 349 aaPredicted RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 SPC25Q9HBM1 224 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 A1CFQ9NQ94 594 aaKnown RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 CTNNA3Q9UI47 895 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 SPEF1Q9Y4P9 236 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 RPS6KL1Q9Y6S9 549 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 DDX49Q9Y6V7 483 aaKnown RBP2.83□□□□□ -1.96
SKA3-207ENST00000536239 NPC1L1Q9UHC9 1359 aa2.83□□□□□ -1.96
SKA3-207ENST00000536239 LOC102723971A0A1B0GUV8 181 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 GOLGA6CA6NDK9 693 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 GOLGA6BA6NDN3 693 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 AP1G1O43747 822 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 PIAS2O75928 621 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 PPP1R3DO95685 299 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 IFNA2P01563 188 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 GOLGA6DP0CG33 693 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 PAX7P23759 505 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 U2AF2P26368 475 aaKnown RBP eCLIP2.82□□□□□ -1.96
SKA3-207ENST00000536239 ABCD1P33897 745 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 MAGEA8P43361 318 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 MAGEA9P43362 315 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 PTDSS1P48651 473 aaKnown RBP2.82□□□□□ -1.96
SKA3-207ENST00000536239 CXCR3P49682 368 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 AGFG1P52594 562 aaKnown RBP2.82□□□□□ -1.96
SKA3-207ENST00000536239 ITGA8P53708 1063 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 ROR2Q01974 943 aaKnown RBP2.82□□□□□ -1.96
SKA3-207ENST00000536239 POU5F1BQ06416 359 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 CRYZQ08257 329 aaKnown RBP2.82□□□□□ -1.96
SKA3-207ENST00000536239 TRAF1Q13077 416 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 DNASE1L3Q13609 305 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 CNGA3Q16281 694 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 TTC31Q49AM3 519 aaPredicted RBP2.82□□□□□ -1.96
SKA3-207ENST00000536239 MAP9Q49MG5 647 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 C6orf10Q5SRN2 563 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 TEX35Q5T0J7 233 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 C1QTNF12Q5T7M4 302 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 RNF187Q5TA31 235 aaPredicted RBP2.82□□□□□ -1.96
SKA3-207ENST00000536239 CENPQQ7L2Z9 268 aaPredicted RBP2.82□□□□□ -1.96
SKA3-207ENST00000536239 FMNL3Q8IVF7 1028 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 PRR26Q8N8Z3 221 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 OR56A3Q8NH54 315 aa2.82□□□□□ -1.96
SKA3-207ENST00000536239 STAG1Q8WVM7 1258 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms