RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 PCDH17O14917 1159 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 FFAR2O15552 330 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 DHHO43323 396 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 CER1O95813 267 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 AKT1P31749 480 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 THBS4P35443 961 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 ME1P48163 572 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 ZNF84P51523 738 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 GRM4Q14833 912 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 ZNF569Q5MCW4 686 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 SYCP2LQ5T4T6 812 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 C16orf89Q6UX73 402 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 RFX6Q8HWS3 928 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 NRACQ8N912 160 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 NPIPB3Q92617 1050 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 PAAF1Q9BRP4 392 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 TRMOQ9BU70 441 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 ABHD14AQ9BUJ0 271 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 FOXP1Q9H334 677 aaPredicted RBP5.81□□□□□ -1.48
PRKDC-205ENST00000535375 POT1Q9NUX5 634 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 SLC52A1Q9NWF4 448 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 IGSF9Q9P2J2 1179 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 NFU1Q9UMS0 254 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 B3GNT3Q9Y2A9 372 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 HS3ST3B1Q9Y662 390 aa5.81□□□□□ -1.48
PRKDC-205ENST00000535375 MYMKA6NI61 221 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 TRIM71Q2Q1W2 868 aaKnown RBP5.8□□□□□ -1.48
PRKDC-205ENST00000535375 XRRA1Q6P2D8 792 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 GGT6Q6P531 493 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 NOL8Q76FK4 1167 aaKnown RBP5.8□□□□□ -1.48
PRKDC-205ENST00000535375 TRABD2AQ86V40 505 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 GLCCI1Q86VQ1 547 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 ZNF527Q8NB42 609 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 GPR78Q96P69 363 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 TUBB6Q9BUF5 446 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 ZNF700Q9H0M5 742 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 ERVK-5Q9HDB9 667 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 HEY2Q9UBP5 337 aa5.8□□□□□ -1.48
PRKDC-205ENST00000535375 GXYLT2A0PJZ3 443 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 F8W810 466 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 UGDHO60701 494 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 CNOT3O75175 753 aaKnown RBP5.79□□□□□ -1.48
PRKDC-205ENST00000535375 SETSIPP0DME0 302 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 DMWDQ09019 674 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 AAK1Q2M2I8 961 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 LIPMQ5VYY2 423 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 PGBD2Q6P3X8 592 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 MORC1Q86VD1 984 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 RHPN2Q8IUC4 686 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 ARFGAP1Q8N6T3 406 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 ZNF366Q8N895 744 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 FAM47BQ8NA70 645 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 ADPRHL1Q8NDY3 354 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 ZBTB9Q96C00 473 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 REXO5Q96IC2 774 aaKnown RBP5.79□□□□□ -1.48
PRKDC-205ENST00000535375 ZFYVE19Q96K21 471 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 CCDC134Q9H6E4 229 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 MOV10Q9HCE1 1003 aaKnown RBP5.79□□□□□ -1.48
PRKDC-205ENST00000535375 MLXIPLQ9NP71 852 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 KCNK9Q9NPC2 374 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 CHST12Q9NRB3 414 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 PAPOLBQ9NRJ5 636 aaKnown RBP5.79□□□□□ -1.48
PRKDC-205ENST00000535375 SLC8A2Q9UPR5 921 aa5.79□□□□□ -1.48
PRKDC-205ENST00000535375 DPPA5A6NC42 116 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 GOLGA6L3A6NEY3 463 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 NKX2-8O15522 239 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 DNPH1O43598 174 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 ASNA1O43681 348 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 SGPL1O95470 568 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 SCP2P22307 547 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 KLRK1P26718 216 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 SOX2P48431 317 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 POLGP54098 1239 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-205ENST00000535375 SLC37A1P57057 533 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 BRD3Q15059 726 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 TWIST1Q15672 202 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 ZNF260Q3ZCT1 412 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 PIM3Q86V86 326 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-205ENST00000535375 MPLKIPQ8TAP9 179 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 MCRS1Q96EZ8 462 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 HTATIP2Q9BUP3 242 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 GATA5Q9BWX5 397 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-205ENST00000535375 SFXN1Q9H9B4 322 aa5.78□□□□□ -1.48
PRKDC-205ENST00000535375 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-205ENST00000535375 AQP12BA6NM10 295 aa5.77□□□□□ -1.49
PRKDC-205ENST00000535375 PRPF4O43172 522 aaKnown RBP eCLIP5.77□□□□□ -1.49
PRKDC-205ENST00000535375 TULP3O75386 442 aa5.77□□□□□ -1.49
PRKDC-205ENST00000535375 ALDOAP04075 364 aaKnown RBP5.77□□□□□ -1.49
PRKDC-205ENST00000535375 GRK5P34947 590 aa5.77□□□□□ -1.49
PRKDC-205ENST00000535375 IL6STP40189 918 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-205ENST00000535375 TLE3Q04726 772 aa5.77□□□□□ -1.49
PRKDC-205ENST00000535375 MTX1Q13505 466 aa5.77□□□□□ -1.49
PRKDC-205ENST00000535375 SPARCL1Q14515 664 aa5.77□□□□□ -1.49
PRKDC-205ENST00000535375 ATPAF1Q5TC12 328 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-205ENST00000535375 SLC39A5Q6ZMH5 540 aa5.77□□□□□ -1.49
PRKDC-205ENST00000535375 TP63Q9H3D4 680 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-205ENST00000535375 ZNF335Q9H4Z2 1342 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-205ENST00000535375 TBC1D3DA0A087WVF3 549 aa5.76□□□□□ -1.49
PRKDC-205ENST00000535375 TBC1D3IA0A087WXS9 549 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms