RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 COL22A1Q8NFW1 1626 aaPredicted RBP4.08□□□□□ -1.76
USP48-215ENST00000534705 ZNF398Q8TD17 642 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 ADAMTS18Q8TE60 1221 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 VPS50Q96JG6 964 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 ZBTB45Q96K62 511 aaPredicted RBP4.08□□□□□ -1.76
USP48-215ENST00000534705 ALS2Q96Q42 1657 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 WDR24Q96S15 920 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 NAA15Q9BXJ9 866 aaKnown RBP4.08□□□□□ -1.76
USP48-215ENST00000534705 SLC25A32Q9H2D1 315 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 ARNT2Q9HBZ2 717 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 RXFP3Q9NSD7 469 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 WWOXQ9NZC7 414 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 SLC27A6Q9Y2P4 619 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 RIPOR2Q9Y4F9 1068 aa4.08□□□□□ -1.76
USP48-215ENST00000534705 DLC1Q96QB1 1528 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 DCCP43146 1447 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 MST1RQ04912 1400 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 FAM135BQ49AJ0 1406 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 ADGRL3Q9HAR2 1447 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 FANCIQ9NVI1 1328 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 OR2W5A6NFC9 320 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 SMIM22K7EJ46 135 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 APOL1O14791 398 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 TPD52L2O43399 206 aaKnown RBP4.07□□□□□ -1.76
USP48-215ENST00000534705 MST1P26927 711 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 MCM5P33992 734 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 DGKQP52824 942 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 CFHR3Q02985 330 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 LAMB3Q13751 1172 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 ACOX1Q15067 660 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 FAXCQ5TGI0 409 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 ZNF813Q6ZN06 617 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 TECPR1Q7Z6L1 1165 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 LIX1LQ8IVB5 337 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 METTL25Q8N6Q8 603 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 PNLDC1Q8NA58 520 aaKnown RBP4.07□□□□□ -1.76
USP48-215ENST00000534705 SUN3Q8TAQ9 357 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 GDF15Q99988 308 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 TBC1D23Q9NUY8 699 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 MGAT4CQ9UBM8 478 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 RGPD5Q99666 1765 aa4.07□□□□□ -1.76
USP48-215ENST00000534705 TMEM232C9JQI7 657 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 PPP6CO00743 305 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 WDR47O94967 919 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 NBPF7P0C2Y1 421 aaPredicted RBP4.06□□□□□ -1.76
USP48-215ENST00000534705 TMEM225BP0DP42 221 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 CYP2A6P11509 494 aaPredicted RBP4.06□□□□□ -1.76
USP48-215ENST00000534705 GABRB3P28472 473 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 EPHB2P29323 1055 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 ALDH5A1P51649 535 aaPredicted RBP4.06□□□□□ -1.76
USP48-215ENST00000534705 TXNL4AP83876 142 aaKnown RBP4.06□□□□□ -1.76
USP48-215ENST00000534705 GPS1Q13098 491 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 MTAPQ13126 283 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 SLC5A9Q2M3M2 681 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 TMEM119Q4V9L6 283 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 KLHDC7AQ5VTJ3 777 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 AWAT2Q6E213 333 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 ABLIM2Q6H8Q1 611 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 SERPINA13PQ6UXR4 307 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 KSR2Q6VAB6 950 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 KIAA0408Q6ZU52 694 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 OR2C3Q8N628 320 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 CCDC150Q8NCX0 1101 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 ABHD5Q8WTS1 349 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 EDC3Q96F86 508 aaKnown RBP4.06□□□□□ -1.76
USP48-215ENST00000534705 KAZALD1Q96I82 304 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 SNX27Q96L92 541 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 TBCBQ99426 244 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 TMOD4Q9NZQ9 345 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 MAFFQ9ULX9 164 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 BRWD3Q6RI45 1802 aa4.06□□□□□ -1.76
USP48-215ENST00000534705 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.06□□□□□ -1.76
USP48-215ENST00000534705 YTHDC2Q9H6S0 1430 aaKnown RBP4.05□□□□□ -1.76
USP48-215ENST00000534705 MSH6P52701 1360 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 SPATA31A1Q5TZJ5 1347 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 LOC102724159A0A0B4J2E5 919 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 PRR23D1E9PI22 279 aaPredicted RBP4.05□□□□□ -1.76
USP48-215ENST00000534705 PPEF2O14830 753 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 CCNT2O60583 730 aaKnown RBP4.05□□□□□ -1.76
USP48-215ENST00000534705 TOM1O60784 492 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 CBFA2T3O75081 653 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 GCATO75600 419 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 FGF18O76093 207 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 PRR23D2P0DMB1 279 aaPredicted RBP4.05□□□□□ -1.76
USP48-215ENST00000534705 ARP10275 920 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 EGR1P18146 543 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 TNFSF4P23510 183 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 NTSR1P30989 418 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 ATICP31939 592 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 HSPA1LP34931 641 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 AK2P54819 239 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 PICALMQ13492 652 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 PMS2P11Q13670 270 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 ATP1A4Q13733 1029 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 PWP2Q15269 919 aaKnown RBP4.05□□□□□ -1.76
USP48-215ENST00000534705 SLC35G1Q2M3R5 365 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 IZUMO3Q5VZ72 239 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 RRAGBQ5VZM2 374 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 TLDC1Q6P9B6 456 aa4.05□□□□□ -1.76
USP48-215ENST00000534705 CRTC1Q6UUV9 634 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms