RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 CCDC103Q8IW40 242 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 ZC3H3Q8IXZ2 948 aaKnown RBP8.16□□□□□ -1.1
CASP4-212ENST00000533730 SPATA18Q8TC71 538 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 GPT2Q8TD30 523 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 HDAC7Q8WUI4 952 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 ATXN2LQ8WWM7 1075 aaKnown RBP8.16□□□□□ -1.1
CASP4-212ENST00000533730 NELFBQ8WX92 580 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 AUTS2Q8WXX7 1259 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 KLHL5Q96PQ7 755 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 MTMR12Q9C0I1 747 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 PLEKHA4Q9H4M7 779 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 CLDND1Q9NY35 253 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 MTRRQ9UBK8 725 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 AGAP1Q9UPQ3 857 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 FAM50BQ9Y247 325 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 HCFC2Q9Y5Z7 792 aa8.16□□□□□ -1.1
CASP4-212ENST00000533730 LAMA2P24043 3122 aaKnown RBP8.15□□□□□ -1.1
CASP4-212ENST00000533730 OR6C75A6NL08 312 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 LRRIQ3A6PVS8 624 aaPredicted RBP8.15□□□□□ -1.1
CASP4-212ENST00000533730 KPNA7A9QM74 516 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 I3L4J1 428 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 PER2O15055 1255 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 HUS1O60921 280 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 OAZ2O95190 189 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 GNA14O95837 355 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 GLUD1P00367 558 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 LTFP02788 710 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 F13BP05160 661 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 RBP3P10745 1247 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 LTBRP36941 435 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 CTSKP43235 329 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 CLCN4P51793 760 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 MRPS5P82675 430 aaKnown RBP8.15□□□□□ -1.1
CASP4-212ENST00000533730 YWHAHQ04917 246 aaPredicted RBP8.15□□□□□ -1.1
CASP4-212ENST00000533730 BFSP1Q12934 665 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 BIRC3Q13489 604 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 TRPC3Q13507 836 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 KCNC3Q14003 757 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 LEXMQ3ZCV2 418 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 ANKRD40Q6AI12 368 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 SLC8B1Q6J4K2 584 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 KLHL10Q6JEL2 608 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 TTI2Q6NXR4 508 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 CRTC3Q6UUV7 619 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 PRSS55Q6UWB4 352 aaPredicted RBP8.15□□□□□ -1.1
CASP4-212ENST00000533730 RBM43Q6ZSC3 357 aaKnown RBP8.15□□□□□ -1.1
CASP4-212ENST00000533730 EP400NLQ6ZTU2 488 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 RTL10Q7L3V2 364 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 ZAR1Q86SH2 424 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 ZDHHC13Q8IUH4 622 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 TMEM86AQ8N2M4 240 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 OR5B17Q8NGF7 314 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 LNX1Q8TBB1 728 aaPredicted RBP8.15□□□□□ -1.1
CASP4-212ENST00000533730 SLC22A17Q8WUG5 538 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 HSPBAP1Q96EW2 488 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 B3GALT6Q96L58 329 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 SENP8Q96LD8 212 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 IMPG2Q9BZV3 1241 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 GDAP2Q9NXN4 497 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 ARMCX3Q9UH62 379 aaPredicted RBP8.15□□□□□ -1.1
CASP4-212ENST00000533730 SIX4Q9UIU6 781 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 RWDD2AQ9UIY3 292 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 MAFFQ9ULX9 164 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 CTNND2Q9UQB3 1225 aa8.15□□□□□ -1.1
CASP4-212ENST00000533730 ATG2AQ2TAZ0 1938 aa8.15□□□□□ -1.11
CASP4-212ENST00000533730 CHD7Q9P2D1 2997 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PTPRJQ12913 1337 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CCDC66A2RUB6 948 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 TRIM49BA6NDI0 452 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CYB561D2O14569 222 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PPEF2O14830 753 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 PCDHGA12O60330 932 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 GLP2RO95838 553 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 ASGR2P07307 311 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 FAM163BP0C2L3 166 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 P4HA1P13674 534 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 IFNGR1P15260 489 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 KCNA5P22460 613 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 ITIH3Q06033 890 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 GTF2H3Q13889 308 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 GALEQ14376 348 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 TESK1Q15569 626 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 GRAMD1BQ3KR37 738 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 ZACNQ401N2 412 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CCDC40Q4G0X9 1142 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CTXN3Q4LDR2 81 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 TPGS2Q68CL5 300 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 LMBRD2Q68DH5 695 aaPredicted RBP8.14□□□□□ -1.11
CASP4-212ENST00000533730 ANKRD54Q6NXT1 300 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 SASS6Q6UVJ0 657 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CYP26C1Q6V0L0 522 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 FRMD5Q7Z6J6 570 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 THEM5Q8N1Q8 247 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CISD2Q8N5K1 135 aaKnown RBP8.14□□□□□ -1.11
CASP4-212ENST00000533730 TOP6BLQ8N6T0 577 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CCDC150Q8NCX0 1101 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 CXorf38Q8TB03 319 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 SHKBP1Q8TBC3 707 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 TAF4BQ92750 862 aa8.14□□□□□ -1.11
CASP4-212ENST00000533730 HPDLQ96IR7 371 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms