RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CDC23Q9UJX2 597 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 TNFRSF18Q9Y5U5 241 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 EMSYQ7Z589 1322 aa3.11□□□□□ -1.91
ATM-220ENST00000533526 A0A087WV62 115 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 LOC105369274A0A096LPK9 316 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 LOC102723532A0A0G2JNH3 316 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 C16orf96A6NNT2 1141 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 M0QZQ0 153 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 RRHO14718 337 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 PCDH17O14917 1159 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 NKX2-8O15522 239 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 PRPF4O43172 522 aaKnown RBP eCLIP3.1□□□□□ -1.91
ATM-220ENST00000533526 DNPH1O43598 174 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 TOP3BO95985 862 aaKnown RBP3.1□□□□□ -1.91
ATM-220ENST00000533526 ITGA2BP08514 1039 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 AKR1A1P14550 325 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 IDUAP35475 653 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 IL6STP40189 918 aaPredicted RBP3.1□□□□□ -1.91
ATM-220ENST00000533526 STAT6P42226 847 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 RBM6P78332 1123 aaKnown RBP3.1□□□□□ -1.91
ATM-220ENST00000533526 TLE3Q04726 772 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 ETFDHQ16134 617 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 PFKFB4Q16877 469 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 AAK1Q2M2I8 961 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 TBRG1Q3YBR2 411 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 ANXA2RQ3ZCQ2 193 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 TRIM60Q495X7 471 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 C16orf89Q6UX73 402 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 SLC39A5Q6ZMH5 540 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 FAM57BQ71RH2 274 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 ANKRD13BQ86YJ7 626 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 OR4N4Q8N0Y3 316 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 NANOGP1Q8N7R0 232 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 FAM47BQ8NA70 645 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 MPLKIPQ8TAP9 179 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 NPIPB3Q92617 1050 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 TRMT61AQ96FX7 289 aaKnown RBP3.1□□□□□ -1.91
ATM-220ENST00000533526 HMCESQ96FZ2 354 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 MPHOSPH6Q99547 160 aaKnown RBP3.1□□□□□ -1.91
ATM-220ENST00000533526 TRMOQ9BU70 441 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 TUBB6Q9BUF5 446 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 GATA5Q9BWX5 397 aaPredicted RBP3.1□□□□□ -1.91
ATM-220ENST00000533526 TM2D2Q9BX73 214 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 SFXN1Q9H9B4 322 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 OBP2BQ9NPH6 170 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 TRNAU1APQ9NX07 287 aaKnown RBP3.1□□□□□ -1.91
ATM-220ENST00000533526 RNF7Q9UBF6 113 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 B3GNT3Q9Y2A9 372 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 SETD1BQ9UPS6 1966 aaKnown RBP3.1□□□□□ -1.91
ATM-220ENST00000533526 ZNF335Q9H4Z2 1342 aaPredicted RBP3.1□□□□□ -1.91
ATM-220ENST00000533526 ZMYM2Q9UBW7 1377 aa3.1□□□□□ -1.91
ATM-220ENST00000533526 CYP3A7-CYP3A51PA0A087WV96 503 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 LGALS16A8MUM7 142 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 F8W810 466 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 SOCS2O14508 198 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 ASNA1O43681 348 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 CNOT3O75175 753 aaKnown RBP3.09□□□□□ -1.91
ATM-220ENST00000533526 ALDOAP04075 364 aaKnown RBP3.09□□□□□ -1.91
ATM-220ENST00000533526 CYP3A4P08684 503 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 CYP3A7P24462 503 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 HOXD9P28356 352 aaPredicted RBP3.09□□□□□ -1.91
ATM-220ENST00000533526 HOXA7P31268 230 aaPredicted RBP3.09□□□□□ -1.91
ATM-220ENST00000533526 GRK5P34947 590 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 THBS4P35443 961 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 NR4A2P43354 598 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 SOX2P48431 317 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 RPL15P61313 204 aaKnown RBP3.09□□□□□ -1.91
ATM-220ENST00000533526 YPEL5P62699 121 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 DMWDQ09019 674 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 KLF9Q13886 244 aaPredicted RBP3.09□□□□□ -1.91
ATM-220ENST00000533526 KRT72Q14CN4 511 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 RBMS2Q15434 407 aaKnown RBP3.09□□□□□ -1.91
ATM-220ENST00000533526 Q4G0T1 1027 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 ANKRD40Q6AI12 368 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 GGT6Q6P531 493 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 SHC4Q6S5L8 630 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 DHRS13Q6UX07 377 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 TFAP2DQ7Z6R9 452 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 RFX6Q8HWS3 928 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 CCDC117Q8IWD4 279 aaPredicted RBP3.09□□□□□ -1.91
ATM-220ENST00000533526 SPICE1Q8N0Z3 855 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 SCARB1Q8WTV0 552 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 SLC39A13Q96H72 371 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 ZFYVE19Q96K21 471 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 FCRL4Q96PJ5 515 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 ABHD14AQ9BUJ0 271 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 KATNAL1Q9BW62 490 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 CCDC134Q9H6E4 229 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 LIN7CQ9NUP9 197 aaKnown RBP3.09□□□□□ -1.91
ATM-220ENST00000533526 MTMR4Q9NYA4 1195 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 ELOVL5Q9NYP7 299 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 SLC12A4Q9UP95 1085 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 CNTN6Q9UQ52 1028 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 ZBTB1Q9Y2K1 713 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 DAAM1Q9Y4D1 1078 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 ZNF521Q96K83 1311 aa3.09□□□□□ -1.91
ATM-220ENST00000533526 TBC1D3DA0A087WVF3 549 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 TBC1D3IA0A087WXS9 549 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 TBC1D3EA0A087X179 549 aa3.08□□□□□ -1.92
ATM-220ENST00000533526 TBC1D3KA0A087X1G2 549 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms