RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 USP36Q9P275 1121 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 FTSJ1Q9UET6 329 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 DNMT3LQ9UJW3 386 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 CAPN11Q9UMQ6 739 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 MYO18AQ92614 2054 aaKnown RBP11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
TRAPPC4-213ENST00000533149 A0A1B0GVT2 93 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 TRIM66O15016 1216 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 EPHB6O15197 1021 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 IL18RAPO95256 599 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 NTRK1P04629 796 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 GYPCP04921 128 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 TPM1P09493 284 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 C1SP09871 688 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 C6P13671 934 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 TRIM21P19474 475 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 CASP14P31944 242 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 ACTN2P35609 894 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 IL12RB1P42701 662 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 MXI1P50539 228 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 ZNF132P52740 706 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 USP46P62068 366 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 NOP14P78316 857 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 APBA1Q02410 837 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 TLE3Q04726 772 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 SRSF1Q07955 248 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 STARD3Q14849 445 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 MAPRE1Q15691 268 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 KLHDC7AQ5VTJ3 777 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 KRT39Q6A163 491 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 FAM171BQ6P995 826 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 SV2AQ7L0J3 742 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 TC2NQ8N9U0 490 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 CCDC150Q8NCX0 1101 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 ERLEC1Q96DZ1 483 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 TMEM176AQ96HP8 235 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 FAM84AQ96KN4 292 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 SLITRK1Q96PX8 696 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 XPO6Q96QU8 1125 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 CGRRF1Q99675 332 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 EDEM3Q9BZQ6 932 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 INTS2Q9H0H0 1204 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 PLCB1Q9NQ66 1216 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 GMIPQ9P107 970 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 EIF2B4Q9UI10 523 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 LUC7L2Q9Y383 392 aaKnown RBP11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 SH3BP1Q9Y3L3 701 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 RAD54BQ9Y620 910 aa11.87□□□□□ -0.51
TRAPPC4-213ENST00000533149 A0A1W2PQJ5 194 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 GABRDO14764 452 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 C4BPAP04003 597 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 KRT9P35527 623 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 CSNK1EP49674 416 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 CCT8P50990 548 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 AP3M2P53677 418 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 KIF19Q2TAC6 998 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 HS1BP3Q53T59 392 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 TDRD10Q5VZ19 366 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 TMEM25Q86YD3 366 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 LRRC8AQ8IWT6 810 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 ADGRF2Q8IZF7 708 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 TOP6BLQ8N6T0 577 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 LRRC52Q8N7C0 313 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 OR5B17Q8NGF7 314 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 C1orf216Q8TAB5 229 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 LMO3Q8TAP4 145 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 SEMA4DQ92854 862 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 IGSF8Q969P0 613 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 IQCDQ96DY2 449 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 ARID3AQ99856 593 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 TTYH3Q9C0H2 523 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 SIX2Q9NPC8 291 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 DNAJC17Q9NVM6 304 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 GDAP2Q9NXN4 497 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 COQ4Q9Y3A0 265 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 SNX11Q9Y5W9 270 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 PTPRJQ12913 1337 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 PTPRQQ9UMZ3 2332 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 DFNA5O60443 496 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 MFAP3LO75121 409 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 BDNFP23560 247 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 POLR2BP30876 1174 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 CSRP3P50461 194 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 TPMTP51580 245 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 UCNP55089 124 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 ZBED6P86452 979 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 LRMPQ12912 555 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 TAF10Q12962 218 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 TARDBPQ13148 414 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 CCDC142Q17RM4 750 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 DUOXA2Q1HG44 320 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 ZACNQ401N2 412 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 PKDCCQ504Y2 493 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 BROXQ5VW32 411 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 TRIM65Q6PJ69 517 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 WDR49Q8IV35 697 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 CNGA4Q8IV77 575 aa11.86□□□□□ -0.51
TRAPPC4-213ENST00000533149 FMNL3Q8IVF7 1028 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms