RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 RFWD3Q6PCD5 774 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 CHST9Q7L1S5 443 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 FAM124AQ86V42 546 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 CREBRFQ8IUR6 639 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 ARHGEF19Q8IW93 802 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 UNC45BQ8IWX7 931 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 SCML4Q8N228 414 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 EHBP1Q8NDI1 1231 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 WFIKKN2Q8TEU8 576 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 HSFY1Q96LI6 401 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 ZSWIM1Q9BR11 485 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 ST7Q9NRC1 585 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.55■□□□□ 0.56
PCF11-206ENST00000533018 PCDH15Q96QU1 1955 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 WDFY3Q8IZQ1 3526 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 GOLGA6L7A0A1B0GV03 622 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 FBXO21O94952 628 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 GNA14O95837 355 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 TOP3BO95985 862 aaKnown RBP18.54■□□□□ 0.56
PCF11-206ENST00000533018 SGSHP51688 502 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 COPAP53621 1224 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 TBX4P57082 545 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 SIM1P81133 766 aaPredicted RBP18.54■□□□□ 0.56
PCF11-206ENST00000533018 PAK1Q13153 545 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 SEMA3BQ13214 749 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 MORC3Q14149 939 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 DCAF12L1Q5VU92 463 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 NUGGCQ68CJ6 796 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 AHI1Q8N157 1196 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 ZNF366Q8N895 744 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 LMO3Q8TAP4 145 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 NUP58Q9BVL2 599 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 SRRTQ9BXP5 876 aaKnown RBP18.54■□□□□ 0.56
PCF11-206ENST00000533018 STIM2Q9P246 746 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 GGA2Q9UJY4 613 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 STOML2Q9UJZ1 356 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 CFAP47Q6ZTR5 3102 aa18.54■□□□□ 0.56
PCF11-206ENST00000533018 GADD45BO75293 160 aaPredicted RBP18.53■□□□□ 0.56
PCF11-206ENST00000533018 GABBR2O75899 941 aa18.53■□□□□ 0.56
PCF11-206ENST00000533018 AFPP02771 609 aaKnown RBP18.53■□□□□ 0.56
PCF11-206ENST00000533018 PABPC1P11940 636 aaKnown RBP18.53■□□□□ 0.56
PCF11-206ENST00000533018 GCNT1Q02742 428 aa18.53■□□□□ 0.56
PCF11-206ENST00000533018 MSANTD2Q6P1R3 559 aa18.53■□□□□ 0.56
PCF11-206ENST00000533018 SCUBE3Q8IX30 993 aa18.53■□□□□ 0.56
PCF11-206ENST00000533018 ZCCHC9Q8N567 271 aaKnown RBP18.53■□□□□ 0.56
PCF11-206ENST00000533018 CADM4Q8NFZ8 388 aa18.53■□□□□ 0.56
PCF11-206ENST00000533018 OR2T3Q8NH03 318 aa18.53■□□□□ 0.56
PCF11-206ENST00000533018 FAM149B1Q96BN6 582 aa18.53■□□□□ 0.56
PCF11-206ENST00000533018 SCNM1Q9BWG6 230 aa18.53■□□□□ 0.56
PCF11-206ENST00000533018 INTS2Q9H0H0 1204 aaKnown RBP18.53■□□□□ 0.56
PCF11-206ENST00000533018 AKAP13Q12802 2813 aa18.53■□□□□ 0.56
PCF11-206ENST00000533018 NUMA1Q14980 2115 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 ZFHX4Q86UP3 3567 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 A0A1B0GTW7 788 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 TYW5A2RUC4 315 aaKnown RBP18.52■□□□□ 0.56
PCF11-206ENST00000533018 C1QTNF9BB2RNN3 333 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 CAPN9O14815 690 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 ACSL4O60488 711 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 ATP5BP06576 529 aaKnown RBP18.52■□□□□ 0.56
PCF11-206ENST00000533018 C1QTNF9P0C862 333 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 POLR2EP19388 210 aaKnown RBP18.52■□□□□ 0.56
PCF11-206ENST00000533018 RDXP35241 583 aaKnown RBP18.52■□□□□ 0.56
PCF11-206ENST00000533018 PIK3R6Q5UE93 754 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 MBLAC2Q68D91 279 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 UNQ6494/PRO21346Q6UXR6 183 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 PIP4P1Q86T03 277 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 ADIPOR2Q86V24 386 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 CCDC117Q8IWD4 279 aaPredicted RBP18.52■□□□□ 0.56
PCF11-206ENST00000533018 TRIM59Q8IWR1 403 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 SNX19Q92543 992 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 UBE2TQ9NPD8 197 aaPredicted RBP18.52■□□□□ 0.56
PCF11-206ENST00000533018 PCDHB9Q9Y5E1 797 aa18.52■□□□□ 0.56
PCF11-206ENST00000533018 UPK3BL1B0FP48 263 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 UPK3BL2E5RIL1 263 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 IRAK2O43187 625 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 FGFR1OPO95684 399 aaKnown RBP18.51■□□□□ 0.55
PCF11-206ENST00000533018 MOCS2O96007 188 aaPredicted RBP18.51■□□□□ 0.55
PCF11-206ENST00000533018 IGLV3-27P01718 113 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 PROS1P07225 676 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 SLC6A4P31645 630 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 CD70P32970 193 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 GRIK2Q13002 908 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 MFN1Q8IWA4 741 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 ADAM32Q8TC27 787 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 DNASE2BQ8WZ79 361 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 KREMEN1Q96MU8 473 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 SERPINB11Q96P15 392 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 DDX50Q9BQ39 737 aaKnown RBP18.51■□□□□ 0.55
PCF11-206ENST00000533018 ADAM33Q9BZ11 813 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 LHX5Q9H2C1 402 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 TMEM245Q9H330 911 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 DNAAF2Q9NVR5 837 aaKnown RBP18.51■□□□□ 0.55
PCF11-206ENST00000533018 EIF2B4Q9UI10 523 aaKnown RBP18.51■□□□□ 0.55
PCF11-206ENST00000533018 NAALADL1Q9UQQ1 740 aa18.51■□□□□ 0.55
PCF11-206ENST00000533018 METTL12A8MUP2 240 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 MED7O43513 233 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 HYAL3O43820 417 aaPredicted RBP18.5■□□□□ 0.55
PCF11-206ENST00000533018 LETM1O95202 739 aaPredicted RBP18.5■□□□□ 0.55
PCF11-206ENST00000533018 DNTTP04053 509 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 DLDP09622 509 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms