RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 TCEA2Q15560 299 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 PLD3Q8IV08 490 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 SKAP2O75563 359 aaPredicted RBP15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 WDR47O94967 919 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 ADRB2P07550 413 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 NOGQ13253 232 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 SDHAF4Q5VUM1 108 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC26A11Q86WA9 606 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 GPR152Q8TDT2 470 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 APBA2Q99767 749 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 ACTR8Q9H981 624 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 IMPAD1Q9NX62 359 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 LOC100653049A0A140TA62 436 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 GNG14A0A1W2PPG7 69 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 NT5C1B-RDH14C9J2C7 533 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 TRDMT1O14717 391 aaKnown RBP15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 KRT34O76011 436 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 KRT6AP02538 564 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 KRT6BP04259 564 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 TPBGLP0DKB5 382 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 KRT6CP48668 564 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 MGAT5Q09328 741 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 PRKAA1Q13131 559 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 GALNTL6Q49A17 601 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 FBXL16Q8N461 479 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 INPP5DQ92835 1189 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 KAT5Q92993 513 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 EVA1BQ9NVM1 165 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 RPS6KB2Q9UBS0 482 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 TMCC3Q9ULS5 477 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC27A5Q9Y2P5 690 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 UBIAD1Q9Y5Z9 338 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 HALP42357 657 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 RFX3P48380 749 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 FUT11Q495W5 492 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 STRA8Q7Z7C7 330 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 RBM23Q86U06 439 aaKnown RBP15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC22A9Q8IVM8 553 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 CYGBQ8WWM9 190 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 UROC1Q96N76 676 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 CTNNAL1Q9UBT7 734 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 PIK3C2AO00443 1686 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 USP2O75604 605 aaPredicted RBP15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 TRIP10Q15642 601 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 LRRC36Q1X8D7 754 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 TRPM8Q7Z2W7 1104 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 DTX3LQ8TDB6 740 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 LENG9Q96B70 501 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 LENG1Q96BZ8 264 aaPredicted RBP15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 NSL1Q96IY1 281 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 ZNF558Q96NG5 402 aa15.14■□□□□ 0.01
PCDHA9-202ENST00000532602 RASSF9O75901 435 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 FLT3LGP49771 235 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 FKBP1BP68106 108 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 CNDP1Q96KN2 507 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 MRPL17Q9NRX2 175 aaKnown RBP15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 FBXO10Q9UK96 956 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 VANGL2Q9ULK5 521 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 RIPK3Q9Y572 518 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 MRC1P22897 1456 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 TMEM88BA6NKF7 163 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 THRAP10827 490 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 GRK2P25098 689 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 RRM2P31350 389 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 CPA2P48052 419 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 ECM1Q16610 540 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 CYP51A1Q16850 503 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 CRY2Q49AN0 593 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 CYP4Z1Q86W10 505 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 ZNF614Q8N883 585 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 TKTL2Q9H0I9 626 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 PRDM16Q9HAZ2 1276 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 BTBD19C9JJ37 291 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 SPATA31D3P0C874 917 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 RARGP13631 454 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 POM121L1PQ3SYA9 428 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 CES3Q6UWW8 571 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 SPATA31D4Q6ZUB0 917 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 TRMT11Q7Z4G4 463 aaKnown RBP15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 VPS50Q96JG6 964 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 EXOSC4Q9NPD3 245 aaKnown RBP15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 MORC2Q9Y6X9 1032 aaPredicted RBP15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 SHPRHQ149N8 1683 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 O00370 1275 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 PSMA4P25789 261 aaKnown RBP15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 MAPK9P45984 424 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 HIRAP54198 1017 aaPredicted RBP15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 ACTN3Q08043 901 aaPredicted RBP15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 ADCK1Q86TW2 530 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 ARMC7Q9H6L4 198 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 HOXB8P17481 243 aaPredicted RBP15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 CTNNB1P35222 781 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 CD99L2Q8TCZ2 262 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 ULBP1Q9BZM6 244 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 EFCAB1Q9HAE3 211 aa15.13■□□□□ 0.01
PCDHA9-202ENST00000532602 PPP3CAQ08209 521 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 DYNC1I2Q13409 638 aaKnown RBP15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 CAPSQ13938 189 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 FNDC3BQ53EP0 1204 aaKnown RBP15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 SUSD6Q92537 303 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms