RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 CEP68Q76N32 757 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 NAT16Q8N8M0 369 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 ZNF557Q8N988 423 aaPredicted RBP11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 RPLP0P6Q8NHW5 317 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 CPA5Q8WXQ8 436 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 SYN2Q92777 582 aaPredicted RBP11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 RMDN1Q96DB5 314 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 TMA16Q96EY4 203 aaKnown RBP11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 BTN2A3PQ96KV6 586 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 AGPAT1Q99943 283 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 NUCKS1Q9H1E3 243 aaKnown RBP11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 SYNCQ9H7C4 482 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 DNAJC17Q9NVM6 304 aaKnown RBP11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 HCN2Q9UL51 889 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 MMP17Q9ULZ9 603 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 USP18Q9UMW8 372 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 DMXL1Q9Y485 3027 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 DOCK4Q8N1I0 1966 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 SDK1Q7Z5N4 2213 aa11.23□□□□□ -0.61
GPATCH4-216ENST00000531900 TBC1D3BA6NDS4 549 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 PRRT4C9JH25 899 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 TRIM24O15164 1050 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 HRO43593 1189 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 LRP3O75074 770 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 F9P00740 461 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 RETP07949 1114 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 C7P10643 843 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 GZMAP12544 262 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 SLC6A4P31645 630 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 CCR1P32246 355 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 CXCR3P49682 368 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 PITX1P78337 314 aaPredicted RBP11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 ENPP2Q13822 863 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 E2F5Q15329 346 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 LPAL2Q16609 132 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 SLC25A52Q3SY17 297 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 C5orf22Q49AR2 442 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 ZC3H12AQ5D1E8 599 aaKnown RBP11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 MS4A13Q5J8X5 152 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 ACBD5Q5T8D3 534 aaPredicted RBP11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 OTUD1Q5VV17 481 aaPredicted RBP11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 NAA35Q5VZE5 725 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 NADSYN1Q6IA69 706 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 ITIH6Q6UXX5 1313 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 DGLUCYQ7Z3D6 616 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 TRMT11Q7Z4G4 463 aaKnown RBP11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 WDR5BQ86VZ2 330 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 SFTPA1Q8IWL2 248 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 IL17RCQ8NAC3 791 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 ADAM32Q8TC27 787 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 DDI1Q8WTU0 396 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 VCPIP1Q96JH7 1222 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 PRMT1Q99873 361 aaKnown RBP11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 TSPY26PQ9H489 355 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 STAP1Q9ULZ2 295 aa11.22□□□□□ -0.61
GPATCH4-216ENST00000531900 CKAP5Q14008 2032 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 PLXND1Q9Y4D7 1925 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 TCRBV5S1A1TA0A578 114 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 LRRC53A6NM62 1247 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 TIMM44O43615 452 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 ADAM23O75077 832 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 GRAP2O75791 330 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 APOEP02649 317 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 CALB1P05937 261 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 FLT3P36888 993 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 NSFP46459 744 aaKnown RBP11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 C1QBPQ07021 282 aaKnown RBP11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 DMWDQ09019 674 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 DMC1Q14565 340 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 EIF4HQ15056 248 aaKnown RBP11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 CRY1Q16526 586 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 RSPO4Q2I0M5 234 aaPredicted RBP11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 BRMS1LQ5PSV4 323 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 FAM102AQ5T9C2 384 aaPredicted RBP11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 MON1BQ7L1V2 547 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 RASSF3Q86WH2 238 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 ATP6V0D2Q8N8Y2 350 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 HJURPQ8NCD3 748 aaPredicted RBP11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 C3orf20Q8ND61 904 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 LMLNQ96KR4 655 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 C1orf74Q96LT6 269 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 GABRG3Q99928 467 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 CD248Q9HCU0 757 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 DDIT4Q9NX09 232 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 DLL3Q9NYJ7 618 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 PLK2Q9NYY3 685 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 ADAM22Q9P0K1 906 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 CALCOCO1Q9P1Z2 691 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 SLC12A6Q9UHW9 1150 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 CLEC4EQ9ULY5 219 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 CAPN11Q9UMQ6 739 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 PAXBP1Q9Y5B6 917 aa11.21□□□□□ -0.61
GPATCH4-216ENST00000531900 GON4LQ3T8J9 2241 aa11.2□□□□□ -0.62
GPATCH4-216ENST00000531900 ANTXRLA6NF34 631 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms