RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 ZC3H3Q8IXZ2 948 aaKnown RBP18.09■□□□□ 0.49
PKP3-208ENST00000531857 TMEM176AQ96HP8 235 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 CDC6Q99741 560 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 ULBP1Q9BZM6 244 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 PCED1AQ9H1Q7 454 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 LHX5Q9H2C1 402 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 TMEM8AQ9HCN3 771 aa18.09■□□□□ 0.49
PKP3-208ENST00000531857 SHROOM3Q8TF72 1996 aa18.08■□□□□ 0.49
PKP3-208ENST00000531857 FAM149AA5PLN7 773 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 ZBED1O96006 694 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 PTPRNQ16849 979 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 MPPE1Q53F39 396 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 KCNT1Q5JUK3 1230 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 ARHGAP17Q68EM7 881 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 PM20D1Q6GTS8 502 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 ADIPOR2Q86V24 386 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 FMNL3Q8IVF7 1028 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 ANKRD52Q8NB46 1076 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 CCDC150Q8NCX0 1101 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 BIRC7Q96CA5 298 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 BBC3Q96PG8 261 aaPredicted RBP18.08■□□□□ 0.48
PKP3-208ENST00000531857 DNAI2Q9GZS0 605 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 TM9SF3Q9HD45 589 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 LMBRD1Q9NUN5 540 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 SFMBT1Q9UHJ3 866 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 CFAP45Q9UL16 551 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 ANKRD6Q9Y2G4 727 aa18.08■□□□□ 0.48
PKP3-208ENST00000531857 BPTFQ12830 3046 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 TRABD2BA6NFA1 517 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 SEMA4FO95754 770 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 C7P10643 843 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 PSMC2P35998 433 aaKnown RBP18.07■□□□□ 0.48
PKP3-208ENST00000531857 SGSHP51688 502 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 RPS14P62263 151 aaKnown RBP18.07■□□□□ 0.48
PKP3-208ENST00000531857 CYP4F3Q08477 520 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 KRT39Q6A163 491 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 CHST9Q7L1S5 443 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 EDEM1Q92611 657 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 TATDN2Q93075 761 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 LRIG1Q96JA1 1093 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 PRSS16Q9NQE7 514 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 ABCB8Q9NUT2 735 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 DKK4Q9UBT3 224 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 PLA2G4CQ9UP65 541 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 MYLKQ15746 1914 aa18.07■□□□□ 0.48
PKP3-208ENST00000531857 H0Y8X5 98 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 RHOBTB3O94955 611 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 FSBPO95073 299 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 MYL1P05976 194 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 CMA1P23946 247 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 GRIA4P48058 902 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 HARS2P49590 506 aaKnown RBP18.06■□□□□ 0.48
PKP3-208ENST00000531857 MCCD1P59942 119 aaPredicted RBP18.06■□□□□ 0.48
PKP3-208ENST00000531857 ENPEPQ07075 957 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 PDE4CQ08493 712 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 ADAM9Q13443 819 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 CAMK2BQ13554 666 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 SUZ12Q15022 739 aaKnown RBP18.06■□□□□ 0.48
PKP3-208ENST00000531857 GOLGA7BQ2TAP0 167 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 CCDC157Q569K6 752 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 KIAA0907Q7Z7F0 614 aaPredicted RBP18.06■□□□□ 0.48
PKP3-208ENST00000531857 WFDC5Q8TCV5 224 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 TMA16Q96EY4 203 aaKnown RBP18.06■□□□□ 0.48
PKP3-208ENST00000531857 EEF2KMTQ96G04 330 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 ORAI3Q9BRQ5 295 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 MTG2Q9H4K7 406 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 OSGEPQ9NPF4 335 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 SCUBE2Q9NQ36 999 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 USP25Q9UHP3 1055 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 GGA2Q9UJY4 613 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 STOML2Q9UJZ1 356 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 HPSEQ9Y251 543 aa18.06■□□□□ 0.48
PKP3-208ENST00000531857 COL5A1P20908 1838 aaPredicted RBP18.05■□□□□ 0.48
PKP3-208ENST00000531857 YJEFN3A6XGL0 299 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 E7ENQ6 273 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 MSI1O43347 362 aaKnown RBP18.05■□□□□ 0.48
PKP3-208ENST00000531857 TNFSF14O43557 240 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 PABPC1P11940 636 aaKnown RBP18.05■□□□□ 0.48
PKP3-208ENST00000531857 GTF2H1P32780 548 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 IL9RQ01113 521 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 ADIGQ0VDE8 80 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 TEAD4Q15561 434 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 ADGRF1Q5T601 910 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 BSPRYQ5W0U4 402 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 GALNT15Q8N3T1 639 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.05■□□□□ 0.48
PKP3-208ENST00000531857 FBXL13Q8NEE6 735 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 WFIKKN2Q8TEU8 576 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 IGSF8Q969P0 613 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 FAXDC2Q96IV6 333 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 SCAND2PQ9GZW5 306 aaPredicted RBP18.05■□□□□ 0.48
PKP3-208ENST00000531857 BTBD1Q9H0C5 482 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 OLA1Q9NTK5 396 aaKnown RBP18.05■□□□□ 0.48
PKP3-208ENST00000531857 RAB20Q9NX57 234 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 TSPAN16Q9UKR8 245 aa18.05■□□□□ 0.48
PKP3-208ENST00000531857 HBS1LQ9Y450 684 aaKnown RBP18.05■□□□□ 0.48
PKP3-208ENST00000531857 SMG1Q96Q15 3661 aaKnown RBP18.04■□□□□ 0.48
PKP3-208ENST00000531857 XPO1O14980 1071 aaKnown RBP18.04■□□□□ 0.48
PKP3-208ENST00000531857 DNTTP04053 509 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 RPL13P26373 211 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms