RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 NDUFAF2Q8N183 169 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 ELMOD1Q8N336 334 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 NAT8LQ8N9F0 302 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 FEM1CQ96JP0 617 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 POLR1BQ9H9Y6 1135 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 PCDHGA8Q9Y5G5 932 aa14.53□□□□□ -0.08
PCF11-204ENST00000530660 RFPL1O75677 317 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 CETN1Q12798 172 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 ITPK1Q13572 414 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 FASTKD1Q53R41 847 aaKnown RBP14.52□□□□□ -0.08
PCF11-204ENST00000530660 TEDDM1Q5T9Z0 273 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 EXD1Q8NHP7 514 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 CFAP36Q96G28 342 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 RTFDC1Q9BY42 306 aaPredicted RBP14.52□□□□□ -0.08
PCF11-204ENST00000530660 MARCH7Q9H992 704 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 PARVGQ9HBI0 331 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 PCDH9Q9HC56 1237 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 XPO7Q9UIA9 1087 aaKnown RBP14.52□□□□□ -0.08
PCF11-204ENST00000530660 TRAF6Q9Y4K3 522 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 AP4S1Q9Y587 144 aa14.52□□□□□ -0.08
PCF11-204ENST00000530660 PCM1Q15154 2024 aa14.52□□□□□ -0.09
PCF11-204ENST00000530660 NAV1Q8NEY1 1877 aa14.52□□□□□ -0.09
PCF11-204ENST00000530660 FAM189A1O60320 539 aa14.52□□□□□ -0.09
PCF11-204ENST00000530660 MAP4P27816 1152 aaKnown RBP14.52□□□□□ -0.09
PCF11-204ENST00000530660 PPP4CP60510 307 aa14.52□□□□□ -0.09
PCF11-204ENST00000530660 SLC10A2Q12908 348 aaPredicted RBP14.52□□□□□ -0.09
PCF11-204ENST00000530660 NEDD8Q15843 81 aa14.52□□□□□ -0.09
PCF11-204ENST00000530660 CCDC58Q4VC31 144 aa14.52□□□□□ -0.09
PCF11-204ENST00000530660 TTC39BQ5VTQ0 682 aaPredicted RBP14.52□□□□□ -0.09
PCF11-204ENST00000530660 TTC33Q6PID6 262 aaPredicted RBP14.52□□□□□ -0.09
PCF11-204ENST00000530660 SEMA4DQ92854 862 aa14.52□□□□□ -0.09
PCF11-204ENST00000530660 SMARCAD1Q9H4L7 1026 aa14.52□□□□□ -0.09
PCF11-204ENST00000530660 TBC1D14Q9P2M4 693 aa14.52□□□□□ -0.09
PCF11-204ENST00000530660 DNMT3BQ9UBC3 853 aaKnown RBP14.52□□□□□ -0.09
PCF11-204ENST00000530660 AGO2Q9UKV8 859 aaKnown RBP14.52□□□□□ -0.09
PCF11-204ENST00000530660 CAPNS1P04632 268 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 KRT5P13647 590 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 CKMT2P17540 419 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 DCKP27707 260 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 ARRB2P32121 409 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 HPCAL1P37235 193 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SLC1A6P48664 564 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 CLK3P49761 638 aaKnown RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 ZNF543Q08ER8 600 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 KLF10Q13118 480 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 INAVAQ3KP66 663 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 MTX3Q5HYI7 312 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 C1orf220Q5T0J3 134 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 FAM20CQ8IXL6 584 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SLC38A6Q8IZM9 456 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 DSELQ8IZU8 1212 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SIX6OS1Q8N1H7 587 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 P2RX7Q99572 595 aaKnown RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 PSD2Q9BQI7 771 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SLC4A5Q9BY07 1137 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 CNGB3Q9NQW8 809 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 HOMER2Q9NSB8 354 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 PI4KBQ9UBF8 816 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 TEX28O15482 410 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 PSTPIP1O43586 416 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 JRKO75564 520 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 BMPR1AP36894 532 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 DPP6P42658 865 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 VAMP7P51809 220 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 CSE1LP55060 971 aaKnown RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 MROH9Q5TGP6 573 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 TXNRD3NBQ6F5E7 133 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SIGIRRQ6IA17 410 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 PPP1R18Q6NYC8 613 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 BNC2Q6ZN30 1099 aaPredicted RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 SLFN12Q8IYM2 578 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 KIAA2013Q8IYS2 634 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 ATP6V0D2Q8N8Y2 350 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 ADAM32Q8TC27 787 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SHC3Q92529 594 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 EGLN2Q96KS0 407 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 DOK1Q99704 481 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 RTKNQ9BST9 563 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 TDRD1Q9BXT4 1180 aaKnown RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 TRPV6Q9H1D0 765 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 PCDHB2Q9Y5E7 798 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 PCDHGA11Q9Y5H2 935 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 CNTNAP2Q9UHC6 1331 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 HTRA2O43464 458 aaPredicted RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 CLIC3O95833 236 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 KRT1P04264 644 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SNRPAP09012 282 aaKnown RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 ENO3P13929 434 aaPredicted RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 POLR2BP30876 1174 aaKnown RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 OPRL1P41146 370 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 HNRNPFP52597 415 aaKnown RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 BASP1P80723 227 aaKnown RBP14.51□□□□□ -0.09
PCF11-204ENST00000530660 PIGGQ5H8A4 983 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 FAM47CQ5HY64 1035 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SLC26A11Q86WA9 606 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SNX32Q86XE0 403 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SLITRK1Q96PX8 696 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SERPINI1Q99574 410 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 POLE4Q9NR33 117 aa14.51□□□□□ -0.09
PCF11-204ENST00000530660 SNX13Q9Y5W8 968 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms