RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 TOGARAM2Q6ZUX3 1019 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 ZNF551Q7Z340 670 aaPredicted RBP3.48□□□□□ -1.85
COPB1-205ENST00000526527 KRT28Q7Z3Y7 464 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 WDR53Q7Z5U6 358 aaPredicted RBP3.48□□□□□ -1.85
COPB1-205ENST00000526527 YTHDF3Q7Z739 585 aaKnown RBP3.48□□□□□ -1.85
COPB1-205ENST00000526527 NEK8Q86SG6 692 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 DTX2Q86UW9 622 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 MORC1Q86VD1 984 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 COL23A1Q86Y22 540 aaPredicted RBP3.48□□□□□ -1.85
COPB1-205ENST00000526527 LRRC71Q8N4P6 559 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 PPP2R3CQ969Q6 453 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 LRRC46Q96FV0 321 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 SNX27Q96L92 541 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 SGCZQ96LD1 299 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 AGAP3Q96P47 875 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 NEK1Q96PY6 1258 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 SH2D3AQ9BRG2 576 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 HERPUD2Q9BSE4 406 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 QTRT1Q9BXR0 403 aaKnown RBP3.48□□□□□ -1.85
COPB1-205ENST00000526527 MAK16Q9BXY0 300 aaKnown RBP3.48□□□□□ -1.85
COPB1-205ENST00000526527 SEMA4CQ9C0C4 833 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 DNAI2Q9GZS0 605 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 CXorf36Q9H7Y0 433 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 ZBTB26Q9HCK0 441 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 NRIP3Q9NQ35 241 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 SNX15Q9NRS6 342 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 SMC4Q9NTJ3 1288 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 TBC1D23Q9NUY8 699 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 SEPT10Q9P0V9 454 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 RABL2AQ9UBK7 228 aaPredicted RBP3.48□□□□□ -1.85
COPB1-205ENST00000526527 DKK3Q9UBP4 350 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 SLC45A1Q9Y2W3 748 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 RRP15Q9Y3B9 282 aaKnown RBP3.48□□□□□ -1.85
COPB1-205ENST00000526527 SNX5Q9Y5X3 404 aa3.48□□□□□ -1.85
COPB1-205ENST00000526527 TMEM233B4DJY2 109 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 QSOX1O00391 747 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 ADAMTS3O15072 1205 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 CD3EAPO15446 510 aaKnown RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 E2F6O75461 281 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 SKAP2O75563 359 aaPredicted RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 FGF18O76093 207 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 NPSP0C0P6 89 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 NHLRC4P0CG21 123 aaPredicted RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 IL1R1P14778 569 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 FERP16591 822 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 DESP17661 470 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 XBP1P17861 261 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 RBL1P28749 1068 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 RDXP35241 583 aaKnown RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 ATP6V1E1P36543 226 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 LIPAP38571 399 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 TNNT3P45378 269 aaPredicted RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 TOB1P50616 345 aaPredicted RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 CCT4P50991 539 aaKnown RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 ALDH5A1P51649 535 aaPredicted RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 PGDP52209 483 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 PDE1AP54750 535 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 TNFAIP2Q03169 654 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 ICA1Q05084 483 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 CCDC173Q0VFZ6 552 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 GPS1Q13098 491 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 SIM2Q14190 667 aaPredicted RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 PSMD6Q15008 389 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 PDCD2Q16342 344 aaPredicted RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 PROSER3Q2NL68 480 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 TBC1D25Q3MII6 688 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 SUPT20HL1Q3ZLR7 823 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 DNAJC21Q5F1R6 531 aaKnown RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 FAXCQ5TGI0 409 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 ANKRD45Q5TZF3 282 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 VPS53Q5VIR6 699 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 PLAG1Q6DJT9 500 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 ANKRD16Q6P6B7 361 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 GATAD2AQ86YP4 633 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 SYTL1Q8IYJ3 562 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 IZUMO1Q8IYV9 350 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 TEX9Q8N6V9 391 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 RP9Q8TA86 221 aaKnown RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 DNAJB14Q8TBM8 379 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 XAGE5Q8WWM1 108 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 ATG4AQ8WYN0 398 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 RSPRY1Q96DX4 576 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 RSRC1Q96IZ7 334 aaKnown RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 VPS50Q96JG6 964 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 VN1R3Q9BXE9 311 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 TRIM5Q9C035 493 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 AMBRA1Q9C0C7 1298 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 SLC25A32Q9H2D1 315 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 RWDD1Q9H446 243 aaPredicted RBP3.47□□□□□ -1.85
COPB1-205ENST00000526527 RMI1Q9H9A7 625 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 PLCB1Q9NQ66 1216 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 NECTIN3Q9NQS3 549 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 ARHGEF3Q9NR81 526 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 SERTAD4Q9NUC0 356 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 PDRG1Q9NUG6 133 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 MTMR4Q9NYA4 1195 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 DNAJB11Q9UBS4 358 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 STEAP1Q9UHE8 339 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 CA14Q9ULX7 337 aa3.47□□□□□ -1.85
COPB1-205ENST00000526527 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms